KEGG   Xiphophorus couchianus (Monterrey platyfish): 114145370
Entry
114145370         CDS       T05908                                 
Symbol
nfatc1
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 1 isoform X1
  KO
K04446  nuclear factor of activated T-cells, cytoplasmic 1
Organism
xco  Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04010  MAPK signaling pathway
xco04020  Calcium signaling pathway
xco04148  Efferocytosis
xco04218  Cellular senescence
xco04310  Wnt signaling pathway
xco04625  C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:xco00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    114145370 (nfatc1)
   04310 Wnt signaling pathway
    114145370 (nfatc1)
   04020 Calcium signaling pathway
    114145370 (nfatc1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    114145370 (nfatc1)
  09143 Cell growth and death
   04218 Cellular senescence
    114145370 (nfatc1)
 09150 Organismal Systems
  09151 Immune system
   04625 C-type lectin receptor signaling pathway
    114145370 (nfatc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:xco03000]
    114145370 (nfatc1)
Transcription factors [BR:xco03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   RHR (Rel homology region) NF-AT
    114145370 (nfatc1)
SSDB
Motif
Pfam: RHD_dimer RHD_DNA_bind
Other DBs
NCBI-GeneID: 114145370
NCBI-ProteinID: XP_027874693
Position
5:complement(26177117..26249197)
AA seq 944 aa
MQDTSSLSVKAKFNFGAAAAAAAAAAGQERGLQRLKSTAAADMKSAEEDAYNYTPNVSLP
IGMSNPCLSTQYHTLQSSPVIPVSSCHQTGYSVQNDNHAASSYYLPQALRPNGAPALESP
RIEITAYSQYPEDEVEASGREDHIIKRGVNSIVTLTLPNVDGYRDPSCLSPASSISSRSC
NSEASSYESGFYNYDNSPQNSPWQSPSVSPRGSSSLLSCPHAIGPAASPHHSPSNSPQIG
AMAEEGWPAQPRGSRPNSPSCSGVGGGNSGGIGKRKYSFSGSSYQQTSCSPNQSPTPSSH
GSPRVSVTDENWLTNTNQYTNLAIVAAINALTTDGMADMGEGIPIKTRKTMLDLSPSMSL
KVEPGGEDLGPEGELRHDEYPSRLSLKKENYCGGFLDVPQHPYSWSKPKPYLSPSLPALD
WQLPSCSGPYNLQIEVQPKSHHRAHYETEGSRGAVKALSGGHPVVQLYGYMESEPLTLQL
FIGTADDRLLRPHAFYQVHRITGKTVSTASHEVMQSNTKMLEIPLLPENNMRAIIDCAGI
LKLRNSDIELRKGETDIGRKNTRVRLVFRVHINQPNGRTVSLQVASNPIECSQRSAQELP
LVEKQSVESYPTTGGKMMLLGGLNFLPESKVVFVEKAQDGHHLWETEAKVDKDSVKTNTL
VVEIPPYRNQRISSPVQVNFYVCNGKRKRSQYQRFTYVPANVPIIKTEPTDEYDSLGSVG
LSMHSKPYYGQPRLTSIMPVAEPDPCLVGGYPPCPPRHAAMPPSSPSSSPTLHDLSPVAY
NKCLPNSPTRATPPGTVAPPIQETPCCPSLPYPTSPDHNSSLVVLHSQGSPGSLGYQHSV
YANSSSSSSPVSHPSTPGGPAETPFFQAYSPSQAEASGSSAQAAGSPPSLLAEDATPPSM
DITIKQEPQELDQMYLDDVAARSAETYRAVGEQVYVRRGNARNR
NT seq 2835 nt   +upstreamnt  +downstreamnt
atgcaggatacctccagcctgagcgtcaaagccaagttcaacttcggagcagcagcagca
gcagcagcagcagcagccggacaggagcggggactccagcgtctcaaatctaccgccgcc
gccgatatgaagtctgcagaggaagatgcatacaactacacaccaaacgtgagtcttcca
attggcatgagcaacccatgcctgtctacgcagtaccacaccttgcagtccagtcctgtc
atcccggtctcctcttgccaccagactggctacagtgtccaaaatgacaaccatgccgcg
tcaagttactacctgcctcaagccttgagacccaacggtgctccggctctggaaagccct
cgtatagagatcaccgcctatagccaatacccggaggatgaagtagaagccagcggcaga
gaagatcacatcatcaaacgaggcgtcaactccattgtcacactgacgctgccgaatgtg
gatgggtaccgtgatccaagctgtctaagccccgcgagcagcatatcctctcgcagctgt
aactcagaggcctcgtcctacgaatctggcttttacaactacgacaattccccgcagaac
tctccctggcagtcacccagcgtttcgcccagagggtcatcctcacttctgtcttgtcca
catgccatcggtcccgcagcctctcctcaccattcgccctccaactccccccaaataggc
gcaatggcagaggagggatggccagcgcagccacgtgggtcccggccgaattccccctcc
tgcagtggagttggcggaggcaacagcggtggcataggcaagagaaaatacagtttcagc
ggctcctcttaccagcagacatcatgctcacccaaccaatcacccaccccttcttcacat
ggttctccgagggtcagcgtcacagatgagaactggcttaccaacaccaaccagtacacc
aaccttgccattgtagcggctattaatgctctcaccacagatggaatggctgacatgggg
gaaggaattccaatcaagacacggaagaccatgctggatctctcaccatccatgagtctg
aaggtggaacccggaggtgaggacctgggtccagaaggggagcttcgacatgacgagtac
ccttcccgccttagcctcaagaaggagaattactgtggagggtttctggatgtaccacag
catccatactcctggtctaaacccaagccttacctcagcccctcactgccggctcttgac
tggcagctgccgtcctgctccggtccgtacaacctgcagattgaggtgcagccaaagtcc
caccacagggcccattatgagacggagggaagccgaggagccgtgaaggcgctgtctggg
ggacaccctgtggttcagctttacggctacatggaaagcgagccgctcaccctgcagctt
ttcatcgggaccgcagacgatcgcctcctgcgaccgcatgccttctaccaggtccaccgg
atcaccggcaaaaccgtctccactgccagccacgaagtcatgcaatccaacaccaagatg
ctggagatccctctgctgccagaaaacaacatgagagccataatcgactgcgcaggaatc
ctgaagctgcgcaattccgacatcgaactgcgcaaaggggagacggacatcggtcggaaa
aacacccgcgtgcgattggtgtttcgtgtgcacatcaaccagcccaacggcaggacggtg
tccctacaagtcgcatcaaaccccattgaatgctctcagcgctcagctcaggagcttccc
ttggtggagaagcagagcgtggagagctatcccaccaccggaggcaaaatgatgctcctc
ggcggcctcaacttcctccccgagtccaaggtggtgttcgtggagaaggcacaggacggc
catcatttgtgggagacagaagccaaggttgacaaggactctgtcaaaactaatactctc
gttgtggagatcccaccctacaggaaccagagaatatccagtcctgtgcaagtcaacttc
tacgtctgcaacggcaagaggaagaggagccagtaccagcgcttcacctacgtgcctgca
aacgtaccaataataaaaaccgagcccactgatgagtatgattctcttgggagtgttggg
ctgtctatgcattcaaagccctactacggccagcccaggctgacgtccatcatgcctgtt
gctgaacctgacccctgcctggttggtggctaccctccttgcccgccccgccatgctgcc
atgccaccgtcgtctcccagctcaagccccaccctgcacgatctgtcccctgttgcatac
aacaaatgcctccccaacagcccaactcgtgccacaccaccaggcactgtagcgcccccc
attcaggagaccccttgctgtccaagccttccgtacccgacatcgccagatcacaactct
tccctagtggtgctccactcccagggcagcccgggctcccttggttaccagcattccgtc
tatgccaacagcagttcctcgtcctccccagtgtctcacccttccactcctggcgggcca
gcggagacaccattttttcaagcgtacagccccagccaggcagaggcttcaggcagctca
gcccaggctgcaggaagtccgcccagtctgctagctgaagacgccactcctccttcaatg
gacattaccatcaagcaagagccccaggaactggatcagatgtatctcgatgatgtggcc
gctcgcagcgccgagacttaccgagcagtgggtgaacaggtttacgttaggagagggaat
gcacgtaaccgctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (6)   
   KEGG PATHWAY (6)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (2)   
   Pfam (2)   
All databases (22)   

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