KEGG   Xiphophorus couchianus (Monterrey platyfish): 114146071
Entry
114146071         CDS       T05908                                 
Name
(RefSeq) partitioning defective 3 homolog isoform X1
  KO
K04237  partitioning defective protein 3
Organism
xco  Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04144  Endocytosis
xco04520  Adherens junction
xco04530  Tight junction
Brite
KEGG Orthology (KO) [BR:xco00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    114146071
  09144 Cellular community - eukaryotes
   04520 Adherens junction
    114146071
   04530 Tight junction
    114146071
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:xco01009]
    114146071
Protein phosphatases and associated proteins [BR:xco01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     114146071
SSDB
Motif
Pfam: PDZ Par3_HAL_N_term PDZ_6 PDZ_2
Other DBs
NCBI-GeneID: 114146071
NCBI-ProteinID: XP_027875634
Position
6:complement(25797825..26055958)
AA seq 1388 aa
MKVTVCFGRTRVVVPCGDGNIKVHALIQQAVMRYKKAIAKDANYWLQVHRLEHGDGGILD
LDDVLCDVADDKDRLIAVYDEQEPHHGGDGTSASSTGTQSPDLFAADLGAGSVASAFQPY
QNASEIEVTPSALRANMPLHVRRSSDPALITINGPFSASELRVQTEEPPSRKNPTRWSTT
AGFLKARHSSGTNSLERKSKGLDTYRSLPRDAGTWSNQREFQRDTARSSLSANHPMVDRW
LEKQEQEEESREDENGRIEPVGRADSCMEHTLVRSLEDIVKLVEVSNDGGPLGIHVVPFS
GRDRRTLGLLVKRLERGGKAEHQGLFQENDCIIRINNRDLRNIRFEQAQNMFRQAMRSPV
IMFHVVPSSMKAHYEQLSHTERNPSFSSGRFSPDSLSGIDHNPQRINRHGSQTQTHPDPN
NGYPHLTHPAVTAAKPPTGHTHSPQRGLNSTPTPGYTKKVGRRFNIQLKKGPEGLGFSIT
SRDVPIGGSAPIYVKNILPRGAAIQDGRLKAGDRLLEVNGVDLNGRTQEEVVSLLRNTPM
GGAVGLLVLRQEDSFPPREVSAEPQKQSLRDLKMEEDELVLTPDGTREFLTFEIPLSDSG
SAGLGVSVKGNRSKENHADLGIFVKSIINGGAACKDGRLRVNDQLIAVNGESLLGKTNQD
AMETLRKSMSTEGNKRGMIQLIVARRVAKRNEDSSGNPLGSQQTVNTSLDDHERRISHSL
YGGLEGLDDDLMPRQGMIPRTIGNYQLSPTVNMPQDDTVIIEDDRPPLLPSNMSDQSSSS
SHDDVGFVADVTPPWAKELPAHNESALSPDENNPDVSFQREGFGRQSMSEKRTKQFGDAT
QLEIIKTRKSKSMDLVADEINLTPRPDTDAGSSTKDVGPSLGLKKSSSLESLQTAVAEVT
LNGDLPFHRPRPRIIRGRGCNESFRAAIDKSYDRPAALEDDDEGMETLEEDTEESSRSGR
DSVSTMADQTPLSAGPEKPLVNGTNRTKEEKKKDKDKPGKEKKKQDGGKEKDKEKGKPKK
GMLKGLGDMFRFGKYRKDERPAEKMDRKGSSKWRTEETQVSDEETMKMRMEQERIQAKTR
ELRERQARERDYAEILDVSRPLDRSSEEDHTYSGVNPLNMDSSHSRAHSPRDEYSHVHHQ
HQHSDSLYSPVSRARNDRPPSTDSNRLTPSNHDRIQRLRQEFQQAQNVPDDPDDRRRTYS
FEQSWSNSSSNGPGGYSQPGRHSVSVEVQMQRQRQEERDSFAQAQRQYSSLPRQPRKNPS
TVSQDSWDKAYPPGDVFQTAKDNPRYSSYQGSRNGYQGGGGGGGAGVNARVLLEAQELLR
QEQRRREQEAKGKMLQEGSRTSAYEGYIPHLKEPGSPKGPYRHDVPPSPSQLARLNRLGS
EKGRLFYS
NT seq 4167 nt   +upstreamnt  +downstreamnt
atgaaagtgacggtgtgcttcggcaggacccgggtggtggttccgtgcggggacgggaac
attaaagtccacgcactcatccagcaggctgtcatgcggtacaagaaggctatcgccaag
gacgcaaactactggctgcaggtccaccgactggagcatggcgacggcgggatcctcgac
ctggacgacgtgctttgtgacgtggctgacgacaaagacagactgatcgccgtctacgac
gagcaggagccccatcacggcggcgacggcaccagcgccagctccaccgggacgcagagc
cccgacctgttcgccgcagacctcggcgccggcagcgtcgcctcggcgttccagccctac
cagaacgccagcgagatcgaagtcacgccttcggccctgcgcgccaatatgcctctccac
gtccggcgcagcagtgaccccgccctgatcaccatcaacgggccattcagcgcctcggag
ttgcgggtccaaaccgaagagcctccatccaggaagaacccgactcgctggtccaccact
gccggcttcctgaaggctcgccattcctcgggcacaaacagcctagagaggaagagcaaa
ggtttggacacgtaccgcagcctgccaagggacgcagggacctggtccaatcagagagag
tttcagagagacacggccaggtcgtcactgagcgccaaccaccccatggtggaccgctgg
ctggaaaaacaagagcaggaggaggagagcagggaggatgagaacgggcgaatcgagccg
gtgggccgagccgactcctgcatggagcacaccctcgtcagatctctggaagacattgtg
aaactggtggaggtgtcaaacgacggcgggcctctggggatccatgtggtgcctttcagt
ggcagggaccgcaggactcttggcttgttggtcaagcgtctggagaggggaggaaaggcc
gagcaccagggccttttccaggagaacgactgcatcatccgtatcaataacagagacctg
cgaaacatccgattcgaacaagcacagaacatgttccgccaggccatgcgttccccggtg
atcatgttccacgtggtgccgtcgtccatgaaggcccactacgagcagctatcgcacacc
gagaggaacccctcgttttcctcgggacgcttcagcccagactcgctgtccggcatcgat
cacaacccacagaggataaaccgccacggatcccaaacgcagacccacccggacccaaac
aacggctacccacatctgacccaccctgccgtcacagcggccaaacctcccacaggccac
acccactcacctcagagggggctgaactcgacgcccacgccggggtataccaaaaaagtg
gggaggcggtttaacattcaactcaagaaaggccctgaaggactcggcttcagcataacg
tcgcgtgacgtccccatcggcggctccgctccgatctacgtcaagaacattctcccccgg
ggggccgccatccaagatggccgccttaaggcaggagaccggctgctggaggtgaacggc
gtggacctgaacggccggacgcaggaggaggtcgtctcgttgctcaggaacactccgatg
ggcggcgcggtggggttgctggttctacgccaggaagactctttcccaccccgagaagtc
agcgctgaaccccagaagcaatccctcagagacctgaaaatggaggaggatgaactagtc
ctgactcccgatgggaccagagagttcctgaccttcgagatcccgctcagcgactcgggt
tctgcaggtttgggcgtcagcgtgaaaggcaaccgctccaaggaaaaccacgcagatctc
ggcatatttgtcaagtcaatcataaacggtggagcagcctgcaaggatggacgactgagg
gtgaacgaccagctgattgcggtgaacggcgaatcgctgttggggaaaaccaaccaagac
gccatggagacgctgaggaagtcgatgtcaacagaaggcaacaagcgcgggatgatccag
ctgattgtggcccgacgagtggccaagagaaacgaggattcttcaggaaacccgttggga
tcccagcagaccgtaaacaccagtctggacgatcacgagcgcagaatctcccactccctc
tacggtggcctggaaggcctcgatgacgacttgatgccacgtcaaggaatgattccacgt
acaataggaaactatcagctctctccgaccgtcaacatgccgcaggacgacactgtgatc
atcgaggacgaccgcccgccgctcctgccgtccaacatgtccgaccagtcctcgtccagt
tcccatgacgatgtgggcttcgtggctgatgtgactccaccgtgggccaaagagctgcct
gctcataacgaaagcgctctgagtccagatgaaaacaatccggacgtctcgttccaaagg
gaaggtttcggacgccagagcatgtcggagaaacgcaccaagcagttcggagacgccact
cagctcgagatcatcaagacacgcaagtccaagagcatggatctagtagccgacgagatt
aacctcactcctcgccccgacaccgacgcaggttcttccactaaggacgttggaccttca
ctgggcctcaagaagtccagctctctagagagcctccagacggcggtagcagaggtcacc
ctgaacggtgacctcccgttccaccggccgcgccctcgcatcatcagggggcggggctgc
aacgagagcttccgggccgccatcgacaaatcctacgaccggccagccgccttggaagac
gacgacgagggcatggagactttggaggaagacacggaggagagttcccgatctgggaga
gactctgtctccaccatggcggaccagacgccgctgtccgccggccccgaaaagcctctg
gtcaacggcaccaaccgcaccaaggaggagaagaagaaggataaagacaaaccggggaag
gagaagaagaaacaagatggagggaaggaaaaggataaagagaagggaaaaccaaagaaa
ggaatgctgaagggacttggagacatgttcaggtttgggaaataccgaaaagatgagcgg
ccagcggagaagatggaccggaaaggatcgagcaagtggaggaccgaggagactcaggtt
tctgatgaggaaacgatgaagatgaggatggagcaagagaggattcaagccaagacgagg
gagctgagggaacgccaagcccgggaacgggactacgcggagatcttggacgtcagccgc
ccattggatagatcctctgaggaggatcacacctactccggcgtgaaccctctgaacatg
gacagcagtcacagccgggctcacagcccccgtgacgaatattcccacgttcatcaccag
caccagcactctgactctctctactcgccggtcagccgggcccgaaatgaccggcctcca
tccacagacagcaaccggctaactcctagcaaccacgaccggatacagaggctgcggcag
gagttccagcaggcccagaacgttcccgacgacccggacgatcgcaggaggacctacagc
ttcgagcagtcctggtccaactccagcagcaacggtccgggcgggtacagccagccgggc
cggcactcggtgtcggtggaggtccagatgcagaggcagaggcaggaggagagggactcg
ttcgcccaggcgcagcggcagtacagctctctccctcgacaacccaggaagaatcccagc
accgtctcccaggactcctgggacaaggcgtacccacctggagacgtcttccagacggcc
aaagacaacccccggtactccagctaccagggctcccggaacggctaccagggcggcggc
ggcggcggcggggcaggagtgaacgctagagtcctgctggaggcccaagagctgctgcgg
caggagcagaggcgcagggagcaggaagccaaaggaaaaatgctgcaggaaggcagcagg
accagcgcctacgaggggtacatcccccacctgaaggagccggggtcgccgaagggcccg
taccgacacgacgtcccgccttcgccgtcgcagctagctcggctcaacagactggggtca
gaaaagggaagacttttttattcctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (4)   
   Pfam (4)   
All databases (21)   

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