KEGG T05908: 114146389

Xiphophorus couchianus (Monterrey platyfish): 114146389

Entry

114146389         CDS       T05908

Name

(RefSeq) eukaryotic translation initiation factor 4 gamma 1-like isoform X1

K03260

translation initiation factor 4G

Organism

xco Xiphophorus couchianus (Monterrey platyfish)

Brite

KEGG Orthology (KO) [BR:xco00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xco03019]
    114146389
   03012 Translation factors [BR:xco03012]
    114146389
Messenger RNA biogenesis [BR:xco03019]
Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     114146389
   mRNA cycle factors
    Stress granule specific factors
     114146389
Translation factors [BR:xco03012]
Eukaryotic type
  Initiation factors
   eIF-4
    114146389

SSDB

Motif

Pfam:

MIF4G MA3 W2 eIF4G1-like_eIF4E-bd RabGAP-TBC

Other DBs

NCBI-GeneID:

114146389

NCBI-ProteinID:

XP_027876172

Position

6:14520502..14541889

AA seq 1709 aa
MNKPPQPITGPTSVPNPSPSPVLNQAAYGPGQPPSLVFATPPQMNSAQQPRQFATGPRTL
HQQGGYRALQSYYPSRATMAASGPRVQTTSGPRPVAPAHVYPTSSQMMMIPQQQISFGGS
PQSYFIPPGQYRTPYMPPTQQYPVTSGTGFYPGTSPAEYSAYEPSLAARERRGGGGRGGG
RENGRLSLHGAPLTSQRYPAGAYYPAQPQYSASVQPAQVMINPQQQAPPPQQAPTQPQAP
PKRERKQITIRDPNQGGRDITKEIMSGGRSTTTATPPLASVAEVSVAQTNGEVVQTVAVV
ARRDEPVEPSASPESPPPAAPANTDLVVEAKQEINRPFTPPVELATQSVATTASAERLSP
SLKERQSPPTLPSAAAGISGVAEAVTMVGSKAGDTVDAPVRPSASPVAQETPLKTEEPQA
APSVEKEVKPEGVQLEKEEPTASAKSEPPVEVAVTPVETVKEDASAKPSSNVSQPLAVPE
PAASQAEDADQSSEPELVEVHPAESPLSNGLPQETEELSEDVPVSDTTPQDKPDPSQSQE
SATPAQKEEDEEEETREEERPQKKTEDAPLASASCPEETTMQAATSVPKKKKSMKELNKK
AIGGLLDAFEEQEPDATPVPEPSAVQVSPPAPAKPPAETVDETSEEKEDKQNAEPDKLES
TLDPTEQKYQYKEDLGEPINPEAKKRYDREFLLGFQFSSASMHKPEGLPVISDVVLDEVN
KTPLRPVDPSRLMSAGSDFTPTFLGGLGGKSAGRPQPSGSHRSQQSLRKEPKKIIIFNSR
SLTDNVQLNKAANAWKPSTIKPEDNNPEEADAEQGKTHEVFKRLRSILNKLTPQKFQELM
KQVMELKIDTEERLKGTIDLIFEKAISEPNFSVAYANMCRCLIGLKVPAPDKPGNFVNFR
KLLLNRCQKEFEKDQDDDEIFEKKQKEMEASKNDEERERLRVELEESRDIARRRSLGNIK
FIGELFKLKMLTEAIMHDCVVKLLKNHDEESLECLCRLLSTIGKDLDFEKAKPRMDQYFN
QMDKIIKERKTSSRIRFMLQDVLDLRKNNWVPRRGDQGPKTIDQIHKEAELEEHREQIKV
QQQLLSKKDSRGPHTPARGRVAQSQDEGWNTVPISKNRPIDITRLSKITKPGALDFNNQR
LAPDGKGMWGSWGKGSSGGSGAKPASGDQDSGRPATSTLNRFSALQQSGAMSSSTDTDRR
VPQRSSGSRERGGDRDRNDHDRDRYDRFARSERQDGNQFSKRSFSRESQERGGRGGDSRA
TAESVRRVASMTDNRDRGSRDRGSRDRGSRDQGGRNRGSRDQGSRDRGSHDRGSRSQSGR
DTGPSKDLPVKRESVPASLPKPAMTEEEVRKKTNAIIEEYLHINDIKEALQCVAELNSAS
LLYVFVSCGLESTLERSTLARERMGLLLHRLVEAGTLPVQQYYQGLLEILEVAEDMAIDI
PHIWLYLAELITPMLHDRGIPMGQLFREISKPLVPLEKAGLLLAQIIKLLCKGMTHEKVG
SLWREAGLNWNEFLSKDEDVNKFVTDQKVEFTTGEETESEEAGRKQILSGDEISKELDQL
LQEKANNQRIRDWIEANLDEQQCASSQFLRSLMTSVCQSAIICDNPYKVDEEQIKERASL
LQRYLCDEEKALQALYALQALMVHMEQPASLLLMFFNSLYDEDVIDEEVFYKWESCKDPA
EQTGKGVALKSVTGFFTFLRNAEEESDKD

NT seq 5130 nt +upstreamnt +downstreamnt
atgaacaaaccaccacaacctataacgggacccacctctgtcccaaatccttccccatcc
cctgtattaaaccaggctgcatacggccccggacaaccaccttctcttgtttttgccacc
cctccgcaaatgaactccgcacagcagccgagacagtttgctacaggtcctcgtacttta
caccaacagggtggatacagagcattgcagagttactatccgagtcgagccactatggcc
gccagcggtcctcgggtgcagacaaccagtggccctcgacctgttgcacctgcgcatgtg
taccctaccagctcccagatgatgatgatcccccagcagcagatttctttcggtggctct
cctcagagctattttatcccacctggacagtaccgtactccatacatgcctcctacccaa
cagtatcctgtgaccagtggcacaggtttctatcctgggactagtcctgcagaatactct
gcttacgagccctctcttgctgcgagggagaggcggggtggtggggggagagggggcggg
cgggagaacggccgtctctctctccacggtgctcctctcacctcccagcgttaccccgca
ggagcgtactatcctgctcagccgcagtactctgcgtcagtccagccagcgcaggtgatg
attaacccacaacaacaagctccacctccccagcaagcacccacacagccgcaagccccg
ccaaagagggaacgcaaacagataacaatacgagaccccaaccaaggtgggcgtgacatt
acaaaggagatcatgtcaggtggaagatctaccacaacagcaactcccccactggcatct
gtagcagaagtaagtgttgcccagaccaatggtgaagtcgtacagactgttgctgtagtg
gcaagaagagatgagcctgtggaaccttctgcctcccctgaaagtcctccacctgctgct
ccggcaaacacggatcttgtggtggaggccaaacaggaaataaacagaccatttactccg
cctgttgaattagcaactcaatctgtggccactacagcctcagctgagagactttccccg
tcgctaaaggagcggcagtctccgcctaccctcccatcagcagcagcaggtatcagtggt
gttgctgaagcagtaactatggtcggctcaaaagccggtgacacagtggatgctccggtc
agaccttctgcatcaccggtagcacaagagacgccgttgaaaacagaggagccacaggct
gctccgtctgtggagaaagaggtgaagccagaaggagttcaactggaaaaagaggaaccg
acagctagcgccaagtcagaaccccccgttgaagttgcagttacccctgtggagactgtg
aaagaggatgcttctgcaaaaccatcaagcaacgtctctcagcccctcgctgtaccagaa
cctgctgcttcacaggcagaggatgcggaccagagctcagaaccagaactggtagaggtt
catccagcagagtctcctctttccaacggccttcctcaggagactgaagaactctctgaa
gatgtcccggtgtctgacactacgccccaggacaaacccgacccttctcaatctcaggaa
tcagcgacaccagcacagaaagaagaagacgaagaggaggagacgagggaggaagagcgg
ccgcagaagaaaactgaagatgctcctcttgcctctgccagctgcccagaggaaactact
atgcaagctgctacgtctgtgccaaaaaagaagaagagcatgaaagagctcaacaaaaaa
gccattgggggccttctggatgccttcgaagagcaggagccagatgccacgcctgttcct
gaaccctcagcagtccaggtcagccctccagcgccagctaagcctcccgctgaaacagta
gatgagacctcggaggaaaaagaggacaagcagaatgctgagccagacaaactcgaatcc
acacttgatccaactgagcagaaataccagtacaaagaagacctgggggagccaataaac
ccagaagcaaagaagcggtatgacagagagtttcttctgggcttccagtttagcagcgcc
agtatgcacaaaccagagggtctgcctgtcatcagtgacgtggtcctagacgaggtaaac
aagactccgctgcggcctgttgatccaagtcggctgatgagtgcgggttcggatttcact
cctacatttttggggggtcttggaggcaaatctgcaggacgaccccagccctctgggtca
catcgctcccagcagagcttgcgaaaagagcccaagaagatcatcatcttcaacagcagg
tctcttacggacaacgtacagctcaacaaagctgcgaacgcctggaagccctcgaccata
aagcccgaagacaacaaccccgaagaggctgacgctgagcaggggaagactcatgaggtg
ttcaagcgtctgcgcagcatcctgaacaagctcaccccgcagaagttccaggagctgatg
aagcaggtgatggagctgaaaatagacacagaagaaaggctgaagggaaccatcgacctc
atcttcgagaaggccatctcagagcccaacttctccgtagcctacgccaacatgtgccgc
tgccttatagggctgaaagtgcccgccccggataaacctggaaactttgtgaacttccgc
aaacttctactcaaccgctgccagaaagagtttgaaaaggaccaggacgatgatgagatt
tttgagaaaaagcagaaagagatggaagcctccaagaatgacgaggagcgtgagcgttta
agggtggaactggaagagtcccgagacatagctcgaaggcgctcgctgggtaacataaaa
ttcatcggcgaactcttcaagctgaaaatgctgacagaggccatcatgcacgactgtgtg
gtcaaactactgaagaaccacgatgaagaatctctggagtgtctctgcagactgctgtcc
accattggcaaagacctggactttgagaaggccaagcctcgtatggatcagtatttcaac
cagatggacaagatcatcaaagagaggaaaacctcgtccagaatccgcttcatgctgcaa
gatgttttggacctacgaaagaataactgggttcctcgtagaggagaccagggtcccaaa
acaattgaccaaatccacaaagaggcagagctggaggagcaccgggaacagatcaaagtc
cagcagcagctgctgtcaaagaaggacagccggggtccgcacacgccagcgaggggccgg
gtggcccagtctcaagacgagggctggaacacagtgcccatctccaagaatcgacccatc
gacatcacccgccttagcaagatcacaaagcctggggccctggacttcaacaatcagcgg
ctggctccggatgggaaaggcatgtggggaagctggggaaaaggcagcagtggaggaagt
ggagctaaaccagcaagtggagatcaagactctggacgtccagccaccagcactctgaac
cgattctcagcactgcagcaatccggggcgatgtcctcatcaacagacaccgatcgcaga
gttcctcagaggtcgagcggcagccgggaacgtggtggtgacagagaccggaatgaccat
gacagggatcgctacgacagatttgctcgcagcgagcgacaggacgggaaccagttctcc
aagagaagtttcagcagggaatcacaggagcgtggtggaaggggcggagacagccgggcc
acagcagaatctgtgcgccgcgttgccagcatgaccgacaatcgggacagaggaagcaga
gaccgaggcagtcgggacagaggaagccgagatcaaggtggtcggaaccgaggaagcagg
gaccaaggcagtcgagacaggggaagccatgacagaggaagcaggagccaaagtggtcgg
gacactggtccgagcaaagaccttccagttaagcgggaaagtgttcctgcttctcttccc
aaacctgccatgacagaagaggaggtgaggaaaaagaccaatgccattattgaagaatac
ctccacatcaacgacataaaggaggcgctgcagtgtgttgcagagttaaatagtgcctct
ctgctctacgtgttcgtgagctgtggcctcgagtcgacacttgaacgcagcacccttgct
agggagcgcatgggtttgttgttacaccgacttgtagaggcagggactttgcccgtacag
cagtactaccaagggctactagagatcctggaagtggcagaggacatggccatagatata
cctcacatctggctctacctggcagaactcattactcccatgctccatgaccgtggcatc
cctatgggacagctctttagggagatctcgaagcctcttgtgcctctggagaaggctggc
ttgctgctggcacagattatcaagttgctctgcaaaggaatgactcatgaaaaggttggg
tctttgtggagagaagccgggctaaattggaatgagttcttgtccaaggatgaagatgtc
aacaagtttgtcacagatcagaaagtggagtttaccacaggagaagagacggagtcggag
gaagctggaaggaagcagatcctcagtggagatgaaatcagcaaagagctggaccaactc
cttcaagagaaagccaacaaccagcgaatcagagactggattgaggccaatctcgatgag
cagcagtgtgcttccagccagtttctacgatcattgatgacatcggtgtgccagtctgcc
atcatatgcgacaacccgtacaaggtggatgaggagcagatcaaagagagagccagtctg
ctgcagagatacctctgtgacgaggagaaagccctccaggccctttatgccctccaggct
ctcatggtgcacatggagcagcctgcaagcctcctgctgatgttcttcaacagtctttac
gacgaggatgtgatcgacgaggaggtcttctacaagtgggagtcctgcaaagatccggca
gagcaaacgggcaaaggcgtagccttgaaatccgtcaccggcttcttcaccttcctccgc
aacgccgaagaggagtccgacaaggactga

All links

Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (6)   
   RefSeq(pep) (6)   
DNA sequence (6)   
   RefSeq(nuc) (6)   
Protein domain (5)   
   Pfam (5)   
All databases (24)   

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