KEGG   Xiphophorus couchianus (Monterrey platyfish): 114148048
Entry
114148048         CDS       T05908                                 
Symbol
rubcnl
Name
(RefSeq) protein RUBCNL-like isoform X1
  KO
K25948  protein associated with UVRAG as autophagy enhancer
Organism
xco  Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:xco00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:xco04131]
    114148048 (rubcnl)
Membrane trafficking [BR:xco04131]
 Autophagy
  Other autophagy associated proteins
   Others
    114148048 (rubcnl)
SSDB
Motif
Pfam: RH_dom RUBC_PIKBD
Other DBs
NCBI-GeneID: 114148048
NCBI-ProteinID: XP_027878768
Position
7:complement(4499393..4520002)
AA seq 741 aa
MPINLPANRKQEVGQFSHQQMGSCDGLSSSPNRGGYVSWSVDSGESRQPSTGPPPGTGEK
EAFSNQNQEPTNSGCVPSLVRSTQEPSGEETNTAFDLPYPRKQLTRRKCTKTSKNSRQIP
RNSKLRDHDRNSKLPRDAMENEEEPSHSKDENVPLHRSSPVISRRSKPISWQEKATSPSN
SLSMDSSPRSPGSRDQPECVTSTGKEDVEPRPTSCHQSFETTMEDKKLRVSLSSSPISIL
SSQDRSSRSPQRSEKELRGWSLNSWSTPNRTGHSSSTPHSKDRSCSELLDLPPDIFKTSC
ELEKENAHLVVVDMMLEVLEGVKWTLSFDSMMYKHCVVCTKRQPSSEGRSPARTHGSNTC
GWTAPQRRPLRDDTRPPRTDWGADPQEPRASHNEHQTKSPSILSTDSGFEDCGVGTMPPD
LIRNSAECLAQQLVLEFKRKWLPSHVHRRGRQSLRSSLQELPGTGGVEVKTGSLTEEIRL
RTRMRGSLNWAPPSSQIIFSVQPQHRRSEVVALQHYLCAGCGTEVEPRYIKKLRHCEYLG
RYFCDCCHSGSEAVIPGRVLSNWDFSRYSVSDFSKQLLDSVWSQPLFDLSSVGKALWSKV
KDLDRFRELREQLIGIRKLLKACRLSERVLAEFEPLPAHLLDEPLLLSMEDLYRVKKGQL
VAQARALLNSALEHVDNCELCRGRGFICEFCRAKDIIFPFQKDKSQRCPVCKACFHKDCF
LGKRCPKCTRIQSRTQVQMKS
NT seq 2226 nt   +upstreamnt  +downstreamnt
atgcccataaatctcccggcaaacaggaagcaagaagtaggacagttttcacaccaacag
atgggaagctgcgacggcttgtcatcgtctccaaacagaggagggtacgtcagctggagc
gtggactctggagagtcccggcaaccttcaaccggacctccaccaggcacaggagaaaaa
gaggctttttctaaccagaaccaggagccgaccaattcaggttgcgtcccatctctggtt
cggtcaacacaagaacccagtggagaagaaacaaatacggcgttcgaccttccgtaccca
aggaaacagctcacaaggaggaaatgcaccaaaacctccaaaaattccagacaaatccca
aggaacagcaagctcagagaccatgataggaactccaaacttccacgagacgctatggaa
aacgaggaggaaccttcccattccaaggatgaaaacgttcccctgcacaggagcagtcca
gtcatctccagacgcagcaagcccatctcctggcaggaaaaggcaaccagcccatctaat
tcattaagcatggactcttcccctcgttcccccggttcacgtgaccagcctgagtgtgtg
acatctactggtaaggaggacgtggagccccggccgacttcctgtcaccaatcgttcgaa
accacgatggaggataagaagctgcgtgtttctctatcgtcaagcccgatcagcatcctg
agtagccaggaccgatccagcagaagccctcagcgatctgagaaggagctccggggatgg
agcctaaacagctggagtacccccaacaggacaggccactcctcctcaacgcctcacagc
aaagacagaagctgctctgaactcctggatttacctccagacatctttaagaccagctgt
gagctggaaaaggagaacgctcatttggttgtggtagacatgatgctggaggttctggaa
ggcgtcaaatggaccctgagcttcgactccatgatgtataaacactgcgttgtgtgcaca
aagaggcagccgagctctgaggggcgcagcccggcgcgcactcacggttccaacacttgc
ggctggaccgctccgcagcgcaggcctctgcgtgacgacacgaggccgccgcggacggac
tggggtgcggatccacaggagccacgggccagtcacaatgaacatcaaaccaagagtccg
tcgatcctttctactgacagcgggtttgaagactgtggggtcggcacaatgccaccagat
ttgatcagaaacagtgcagagtgtctggcccagcagctggtgctggagttcaaaaggaag
tggcttccttcccacgtgcatcggcgaggacggcagagcctccgcagttcactgcaagag
ttaccaggtactgggggtgtggaggtaaagactgggagtttaacggaggagatccgactc
aggaccaggatgagaggatcccttaactgggcgccgccgagttcccagatcattttctct
gtccagccgcaacacagacggagcgaggtggtagccttacaacactacctgtgtgcgggc
tgcgggacagaggtggagcccagatacatcaagaaactgcggcactgtgaatatctggga
agatatttctgtgactgttgccacagtggatcagaggctgttattccgggtcgagttctg
tccaactgggactttagcaggtactctgtgagcgacttctccaagcagctgctggactcg
gtctggtctcagcctctgttcgacctcagctctgtgggaaaggctctgtggagcaaagtg
aaagacctggacaggttcagggagctgagagagcagctgatcggaatcaggaagctgctg
aaagcctgcagattatctgaaagggtgttggccgagtttgagccacttcctgctcacctg
ctggacgagcctctgctcctctccatggaagacctctacagagtgaagaagggtcagctg
gtggcgcaggcccgagcgctgctcaactcggctctggagcacgtcgacaactgtgagctg
tgtaggggccgcggcttcatctgcgagttctgtcgagcgaaggacatcatctttcctttt
cagaaagacaaaagccagcgatgtccagtgtgcaaggcttgctttcacaaagactgtttc
ctggggaaaaggtgtccgaaatgcacacggatccagtcccgaacacaagtccagatgaag
tcatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

Download RDF
DBGET integrated database retrieval system