KEGG   Xiphophorus couchianus (Monterrey platyfish): 114149447
Entry
114149447         CDS       T05908                                 
Symbol
nup214
Name
(RefSeq) nuclear pore complex protein Nup214 isoform X1
  KO
K14317  nuclear pore complex protein Nup214
Organism
xco  Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:xco00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    114149447 (nup214)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xco03019]
    114149447 (nup214)
Messenger RNA biogenesis [BR:xco03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     114149447 (nup214)
SSDB
Motif
Pfam: Nup214_FG ANAPC4_WD40 WD40 NUP214
Other DBs
NCBI-GeneID: 114149447
NCBI-ProteinID: XP_027881115
Position
8:17712531..17742231
AA seq 1992 aa
MGDDADSPPEREMKDFQFRQMKKVQVFEAAEDMPKDRSSLLTVSNKYGLTFVGLGRTFKV
YLTLNILAADKADGSSYEVVKGIPALVEVTGDMSLHHLALSCDELTLSVCGTSEETGLSI
AFYDVRTFINKARPQKSPFASLQPAVASDALVQDLKWNPAQPSMLAACLSDGSMMILEVT
DSVKIQAQLLANSGVTCLSWSPKGKQVAVGKMNATVSQYTPALEEKRVIPCPPFYNSDDP
VKALDVLWLRTPVFAVAYVYADGCLETPPELVLISLPKKDEKVEPKYLNFGESVFGSCTE
RQHHYFLSHIEDWDLMLAASAASIEVSVIARQDDRMWEVWLLEDASRAELPVTETNDDTL
PLGLAIDYTSQQEIQITDEKTLPPAPTMLMLSTEGVLCPFALLNLNPGVKQLVSPFTALT
LEGERQPKPVSLAAQPAKTTASAGSAPAAFPNIALASVSSASSAPASSAPAASSLAVPFN
FVPAAPVSSSSSEFTFSVPTTHATTTLPPAFSLGGSGPFSSVSSSFSFASKPPSETPSAA
SAFSFSTPSMKPAAPAPAPVSTPQSLPAASLPSVKLNLNDRFTSGETPAPAFSFNSTLPK
AAASSSSTASTLSLPATKPPVVLTPVRPVQTGTPPSAVQKPAPTTQGRTQPPQATVSMKT
LEKQLQQKKESDPIMTGILEEIAHFQKELDDLKSRSTKADFKVGTNDGMKDLRKESEDLH
IFTLEIKETTESLHGDIGTLKTTLIEGFAGAEEAKTQSELSKDKNYRQLLYKKSLDPRSE
EQLKEIRRLYQYVTSAVEDVNDVLDVEWEKHLEKKKKQKHMVVPGREGLFTTLSNNIYII
NQQKNRLDQLVQELTSLRLYSKNAAPSISQNIATGPTAAGFENELESLKDAFLKARLDVT
PPKVKARSSAVKISPIKQSQLRNFLSKGQMPPVRSTAPANLSRSAFLSPKYYEDLDDASS
TSSLSQSLEPHPSHLDQEEEELQPLQPPAVTALSTPRHPTVVRTPSIQPGFGGIQSTPLP
KIHSAPSLGFGLSPIPSPVPTNKINLSGADSTALATKTVKHGAPPTERTVPMSAQQAAAN
AAMRRQMANQKPAPVSSSLTESTLKTVPQVVNVQELKEKGLPVQVSSIISSSVPDLTNQA
FANQVKRVSTTTPGIQKISNESTYGLQPGFVFGPSSKTDVSDVPNSSVEPNISKPFSFTP
GSAGFPFPSVSQGAGMTQAVKDVSKFSFGGNGKMVFGQTAEEPFSLTPKSVASSIGTGTP
TLPLSTSGEAAKHSSLSTAFRTEPQPPKTSGGETLGCFSGLRVGPGEEIKDTVTKPAAAF
TFGEPGLGSGKGVQSFSFASGFQKPAEDSGTTDLSKGASSSSLFKPPETNSKTTFSLPPS
NATPSTLPTSFSSLLAGSSEEPKAPPQLSEPTPPPEKEPSTTEPAGENASQSVAPEPAVD
SSSTATTTPALPALTTATIQDLPSANVAPAEVTPPAPSVVPFSTKATPDLSFTSSVSTSA
VPTMAPVSQGAPPAFQVPISEKPGSIFTQPTPAPAATPVPASAPVPAPATTDSSSIGATP
VINTAAPVATTTTPTTVTPAPTTTANTVFGQQVVPPASSAPSATGFGSTGFSASTGAGFN
KSVFGQSGFGQPAGSAGSSSGFSFTQSVFGPSSSSATTGGTSLFGASTAGGASSFSFGSG
STNTASSTGSGMFGQSTTPAFGQSSGFGQPSGFGSNTTTSSSSGFSFGQPSGFGSSAANP
VFGQQSATGSVFGQSSSGNSLFGSTSANAAGSSSGGFFSGLGGKPSEDAANKNPFGAAGS
TGGFGQPAQSGSNNLFGNSGAKAFGFGQTSSAFGDQKPSGTFSTGGGSVASQGFGSFSSP
TKPGGFGSPPVFGSPPSFGGSPAFGNTASFGTSPSFSNALNPSTGKVFGEGTAAANMGGF
GFSSAPSAPSFGALASQTPPSFGTLVQQGSTFGSQPSSFSGFGQQPQTGGFPVNTFGSAS
QSSSQTFSSWRS
NT seq 5979 nt   +upstreamnt  +downstreamnt
atgggagacgacgcagacagccctcctgagagggaaatgaaggattttcagtttcgacag
atgaagaaagtacaagtttttgaggctgctgaagatatgccaaaagacagatccagtcta
cttactgtttcaaacaaatatggcttgacatttgttggccttggccgaacattcaaagtg
tatcttactttaaatattcttgctgctgataaagctgatgggagctcctacgaagtagtc
aaaggtataccagctctggtggaagtgactggggacatgtctttgcaccacttggctctg
agttgtgatgaactcactttgtcagtttgtgggacatccgaggaaaccggtttgtccatc
gcattttatgatgtccgaaccttcataaacaaggccagaccacagaagtcaccatttgcg
tcattgcagccagctgtggcctctgatgctctggttcaggacctgaagtggaaccctgct
cagccttccatgttggctgcctgcttgtcggatggcagcatgatgattcttgaagttaca
gacagtgtcaagattcaggctcagctacttgctaacagtggtgtcacctgccttagctgg
agtccaaaaggaaagcaggttgctgtgggaaaaatgaatgccaccgtcagccagtataca
ccagctctggaagagaagagagttatcccatgtccacctttctacaattctgatgaccca
gtcaaagctctggatgtgctgtggcttagaacacctgtgtttgcagtggcatatgtttat
gcagacgggtgtcttgagacccctccagagctggtgctgatctccctccctaaaaaggat
gagaaagtggagccaaagtatttgaacttcggtgagagtgtttttggcagctgtacagag
cgacagcatcactacttcctcagtcacatagaagactgggatcttatgttagctgcgtca
gcggcgtcgattgaggtcagcgtgattgcaagacaagatgacaggatgtgggaggtttgg
ctcctagaagatgctagtagagcagaacttccagtgacggagacgaatgacgacaccctg
cctcttggcttagctatagactacacaagccagcaggagatccaaatcactgacgagaag
actttgcctccagctcccacaatgctaatgctgtccacagagggagtactctgcccattc
gctcttctcaacctgaatcctggggttaagcagctagtctccccatttactgccctcacc
ttggaaggagagaggcagccaaagccagtttccttggcagcccaaccagccaaaaccact
gcctcggctggatctgctccagcagcgttcccaaacattgctcttgcatccgtctcttct
gcttcgtctgctcctgcttcgtctgctcctgctgcatcttccttggctgtcccgttcaat
tttgttcctgcagctccagtgtcatcctcttcatcagaatttactttttcagttccaacc
actcatgccaccaccaccctccctcctgctttctcccttgggggatctggaccttttagc
tcagtatcctcgagcttctcttttgcttccaaacctccttctgaaactccctctgctgct
tcagcattttcgttcagcaccccttccatgaaacccgcagctccagctccagctccagtg
tcaacccctcagagccttcctgctgcctcccttccttctgtcaaattaaatctaaatgac
agatttacatcaggggagaccccagcaccagctttctcctttaactccacacttcccaag
gctgctgcttcctcttccagtacagctagcaccctttcactcccagccacgaagcctcca
gttgtattgaccccagtgcgtccagttcagacaggcacacctccctcagctgtccagaaa
ccggctcctactacacaagggcgtacccaacctccgcaggcaacagttagtatgaagact
ctggagaagcagctgcagcagaagaaagaatctgatcccattatgactggtattttggag
gagattgcacacttccagaaggagttagacgacctgaaatcgcgcagcacgaaagctgac
tttaaggttggtactaacgacgggatgaaggatctgagaaaagaatctgaagaccttcac
atcttcaccctggaaataaaagaaaccactgagtctctccatggggacattgggacgctg
aagaccactttaattgaaggctttgctggggcagaggaagccaaaacgcagagcgagttg
agcaaagacaaaaattacagacagctgctgtacaaaaagtctctagatccacgcagcgaa
gaacagctcaaggaaattcgcagactttaccagtatgtcacatctgctgtggaagacgtt
aatgacgtcttagacgtggaatgggaaaaacacctggagaagaagaagaagcagaaacac
atggttgttcctggacgggagggtctgttcactacactgtccaacaacatctatatcatc
aaccagcaaaagaaccgactggaccagctggttcaggagctcacatcactgcgcctttac
agtaaaaatgctgctccttccattagccagaacattgcaactggacctacagctgctggt
tttgaaaatgagcttgagagtttaaaggatgcattcctgaaagccaggctggatgttact
ccacctaaagtcaaagccagatcttcagcagtcaagatatcaccaattaaacagtcccaa
cttcgcaatttcctctcaaagggacagatgcctcctgtacgctcaactgcaccagccaac
ttgtctcggtcagcgttcctttccccaaaatactatgaggacctggatgatgcaagctca
acgtcctctctgtcccagtccttggagcctcacccgtctcacttggaccaggaagaggaa
gaactacaaccactacagcccccagctgtgacagcgttatccaccccccgccaccccact
gttgtaaggaccccgtctatccaaccaggctttggaggcattcagtccaccccgctacca
aagattcactcagcaccatctttgggttttggactgagccctattcccagtcctgttcca
actaataaaatcaatctcagtggggctgacagcactgctcttgccacaaagacggtaaaa
catggcgctcctccaacagagagaactgtccccatgtctgcccagcaggctgcagccaat
gcagccatgcgcagacaaatggccaatcagaaaccagctcctgttagcagttccttgaca
gagtccaccttaaagactgttcctcaggtggtcaatgttcaggagctcaaagaaaaaggg
ctgcctgttcaggtttcttccatcatcagctcttcggtgccggatctcacaaatcaggct
tttgccaaccaagtcaagcgagtgagtactaccaccccagggattcagaagatttcaaat
gaaagtacatacggtctacagccgggctttgtttttggtccgtcgtccaaaacagatgtt
tctgatgttcctaatagttctgtggagccaaacatcagcaaaccattttccttcacacca
gggtcagcagggttccccttcccttctgtttcacaaggagctggaatgacacaggcagtt
aaagatgtcagtaaattctcctttggtggaaatggcaagatggtatttggtcagactgca
gaagagccgttctctctaaccccaaagtctgtggcctctagtattggcactggaactccc
acgctgcccttaagcacatcaggtgaagcagccaaacacagctccctctccacagccttc
aggacggagccacaaccaccgaagacctctggaggagaaactctcggctgtttttctgga
ctacgcgttggcccaggagaagaaatcaaggatactgtaacaaagccagctgctgcattt
acctttggggaacctggacttggcagtggcaagggagtacaatcattcagctttgcgtca
ggtttccaaaagccagcagaagattctggaactacagatttgtctaaaggcgcttcatca
agcagtttgttcaagcctcctgaaacaaactccaagacaactttctctcttcccccgtct
aacgccacaccttcaaccttgcctacgtcttttagtagccttcttgcaggttcttcagag
gagccaaaagctcccccacagctctcagaacctacaccaccccctgaaaaagagccaagc
accactgaaccagctggggaaaacgccagtcagtctgtggccccagaacctgcagtggat
tcctcatctactgcaacaaccacacctgcacttcctgcgctgacaactgccactatccaa
gaccttccttctgccaatgttgcaccagctgaagtaactcctccagcaccatccgttgtg
cctttctcaacaaaagccaccccagacctctcgttcacttcttctgtttccacttctgct
gttcccaccatggcgcctgtctctcagggagccccgccagcattccaggttcccatttcc
gaaaaaccaggttccatttttacacagcctactcctgcgccagctgctactcctgtccct
gcttctgctcctgttccagctcctgcgacgacagacagcagctctattggggccacacca
gttatcaacacagctgctcctgtagccacaactaccacccctacaaccgttacccctgca
ccaaccaccactgccaacactgtttttgggcaacaagttgtacctccggcttcctctgcc
ccctcagcaacaggatttggctcgactgggtttagtgcttcaactggggcaggttttaac
aaatccgtgtttgggcagagtggcttcggccaacctgctggcagcgccggatcatctagc
ggtttttcttttacccagtcggtatttggaccaagctctagcagtgcaacaactggggga
acgagtctttttggggcttcaactgctggcggtgcaagttcgttctccttcggcagtgga
agcaccaacacggccagcagcactgggtcagggatgttcggacaaagcacaactcctgcg
tttggtcagagctctgggtttgggcagccatcaggctttggcagtaacaccaccacgtcc
tcatcttcaggattcagttttggtcaaccctcaggatttggttcctctgctgccaacccc
gtatttggccaacagtctgcaactggaagtgtatttggacaatcttcatcaggaaacagt
ttgtttggttcaacttcagccaatgcagcaggttcatcttctggaggattcttcagcggc
ctcgggggcaaaccgagtgaggatgccgccaacaagaacccattcggcgccgctggttca
actggagggtttgggcagcccgctcagtctggttccaacaatctctttgggaatagtggt
gcaaaggcctttgggttcggccagacctcctctgcctttggagaccagaaacccagtggg
actttcagcactggtggagggagtgtcgcttcacaggggtttggctctttttcatcacca
acaaaacctgggggctttggcagtcctccagtgtttgggagtcccccgtcttttggtggt
tccccagcttttggtaatacagcatcatttggcacaagcccctccttcagcaatgcattg
aatccctcaactggtaaagtgtttggagagggaacggctgctgcaaacatgggaggattt
gggttctcttctgctcccagtgccccttcgtttggtgctctggccagtcagactcctcct
tcgttcgggaccttggtccagcagggctccacatttggaagtcagcccagcagcttctca
ggctttggacagcagccacagactggaggattcccagtaaacacgttcgggtctgcaagc
cagtcaagttcccaaactttttctagctggcgaagctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (5)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (4)   
   Pfam (4)   
All databases (21)   

Download RDF
DBGET integrated database retrieval system