KEGG   Xiphophorus couchianus (Monterrey platyfish): 114149865
Entry
114149865         CDS       T05908                                 
Symbol
dqx1
Name
(RefSeq) ATP-dependent RNA helicase DQX1 isoform X1
  KO
K14433  ATP-dependent helicase [EC:5.6.2.-]
Organism
xco  Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:xco00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:xco03041]
    114149865 (dqx1)
Spliceosome [BR:xco03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    114149865 (dqx1)
SSDB
Motif
Pfam: OB_NTP_bind HA2_C HA2_N AAA_22 nSTAND3 AAA_19 AAA_16 AAA_25 AAA_29 Rad17 T2SSE AAA_33 nSTAND1 PRIMA1 RsgA_GTPase
Other DBs
NCBI-GeneID: 114149865
NCBI-ProteinID: XP_027881755
Position
8:complement(878275..887869)
AA seq 834 aa
MPALSASCRGSSPAGARYVQSGLTRRQQRAEGGASPRVSSPVSRYDSEQVGSSPYELMMS
SPPSQPIGSAPSALDSLSVSSLLSGDLDDDEAEEEGLGDLEVNPYDGLPFSSRYYALLEE
RRRLPVWRLRQSFLEHLESHSMVLLSGPSGAGKSTQVAQWCVEFSLSFEFSHGLVCCSQP
HPEAALSLALRVADEMDLSLGLEVGYRVSHDDSCTPDTLLRFISDTLLLEEMMSDPLLRQ
YHLVVLDELQERTVPTDVLLGLLCDVCRQRPDGFRVVLLAHPTLAPRLAAFLGPGVPHLA
LDGPERPPHHQVEVMYRELSSGKEPASAACHMVLDLHRRGEEGDMMVFLADAQEVEECLV
LLQKESLALSPQLGSLRFLPLHSGLASLAQRVYESGPGAEPKDDDPSEGDGGVRRKVILC
DALGEASFSLQGVRYVVDTGLQLKTVYNPQIRANSQVLRSISRHQADMRTQRVNSQLSGL
CLRLYSQARYESDMAEARGPRVTEENLSHLVLLLKRLDIADMGQCKFLDRPAPEALMQAL
EDLDYLAALDDDGNLSEVGIIMSELPLEPPLAKALIAACEYDCVEELLTIAAMLTAPSCF
LSPDPSRQEAAVSAWRPLLHPEGDHLTLINVYNAFLEHNEDEAWCSAAFLSHAALRLAGV
IRAELLEVMQRIELPVSPPAFGCQDNCTNIKRALISGFFLKVAHDVDGSGNYLLLTHRHV
AHLHPFSSYRCRQPPPSPPPSPPSPPSWVLYHEFTVSRDNCIRIASEVHPQMLVELTPQY
FLGNLPASDGKELLMELRRSVAPPAGQPDSGDRTQKDKTAETHNQSSTELCVVQ
NT seq 2505 nt   +upstreamnt  +downstreamnt
atgcccgccctttctgcctcctgtcgcggttcttctccagctggtgctcggtatgttcag
agcggactgacacgacggcagcagcgggctgaaggtggagcgtctccccgggtttcctca
cctgtctcccggtatgactcagagcaggtaggctcctccccctatgaactgatgatgtca
tcgcctccgtcgcagcccattggctccgctccctccgctctggactcgctgtccgtctca
tcgctgctgtccggggatctggacgatgatgaggctgaggaggaaggcctgggcgacctg
gaggtcaacccgtacgacggcctgcccttctcctcgcgttactacgccctgctggaggag
cggcggcggctgccggtgtggcggctgcgtcagagcttcctggagcatctggagagccac
agcatggtgctgctgagcgggcccagtggagccgggaagagcacacaggtggcccagtgg
tgcgtggagttctccctgtcctttgagttttcacacggcctggtctgctgctcccagccg
caccctgaggcggcgctgagcctggcgctgcgcgtggccgacgagatggacctgagtctg
ggcctggaggtcggataccgggtgtcgcatgacgacagctgcacacctgacaccctgctc
aggttcatcagcgacacgctgctgctggaggaaatgatgtcggacccgttgctgcggcag
taccacctggtggttctggacgagctgcaggagcgaaccgttcccaccgacgtgctgctg
ggcctgctgtgcgacgtctgccgccagcgacccgacggcttcagggtcgtcctcctcgcc
cacccgacgctggcgccgcgcctcgccgccttcctggggcccggcgtcccacacctggcc
ctggacggccccgaacggcccccgcaccaccaggtggaggtgatgtaccgggagctttcc
tctgggaaggagccggcgtctgccgcctgccacatggtgctggacctgcaccgcagagga
gaggagggagacatgatggtgttcctggccgacgcccaggaggtggaggagtgtctagtt
ctgctgcagaaggagtctctggctctgagtcctcagctcggttcgctccggttcctcccg
ctccactctggcctggccagcctggcccagcgggtctacgagtccggtcccggtgccgag
ccgaaggacgacgacccgtctgagggtgatggcggcgtcaggaggaaggtgatcctctgc
gacgcgctgggagaggcgtcgttctccctgcagggggtccgctacgtggtggacacgggt
ctgcagctgaagactgtttacaaccctcagatccgagccaactcccaggtcctgaggagc
atcagccggcaccaggcggacatgaggacccagcgggtcaacagccagctgtccgggctg
tgtctgcggctgtactcccaggcccggtacgagtccgacatggcggaggcccgcgggccc
agagtcactgaggagaacctgagccacctggttctgctgctgaagaggctcgacatcgca
gacatgggccagtgcaagttcctggaccggccagctcctgaggccctcatgcaggccctg
gaggacctggactacctggccgctctggacgacgacgggaatctgtcggaggtcgggatc
atcatgtcggagctgccgctggagccgccgctagctaaagcgctaatcgccgcctgcgag
tacgactgcgtggaggagctgctcaccatcgccgccatgctgacagctccttcctgcttc
ctgtccccggatcccagcagacaggaagctgccgtctccgcctggcgccccctgctgcac
ccggagggcgatcacctgaccctcatcaacgtctacaacgccttcctggagcataacgag
gacgaggcgtggtgcagcgccgccttcctgagccacgcggcgctgcggctcgccggggtc
atcagggcggagcttctggaggtcatgcagaggattgagcttcctgtttccccgcctgcc
ttcggttgccaggacaactgcaccaatatcaaacgcgccctcatctcaggcttcttcctc
aaagtggctcacgatgtggacgggtccggtaactacctcctgctgacccatcgccacgtc
gctcacctccacccgttctcctcctaccgctgccggcagccgcctcccagtccacctccc
agtcctcccagtcctcccagctgggtcctctaccacgagttcaccgtctcccgggacaac
tgcatccgcatcgcctccgaggttcatccccagatgctggtggagttgacgcctcagtac
ttcctgggaaacctgccggcgagcgacgggaaggagctgctgatggagctgcggcggagc
gtagcgccccctgcaggccagccggactcaggagacaggactcagaaagacaaaacggcc
gagactcacaaccagtccagcacagagctgtgcgtcgtccaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (15)   
   Pfam (15)   
All databases (25)   

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