KEGG   Xiphophorus couchianus (Monterrey platyfish): 114151024
Entry
114151024         CDS       T05908                                 
Name
(RefSeq) lysine-specific demethylase 4B-like isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
xco  Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:xco00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:xco03036]
    114151024
Enzymes [BR:xco01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     114151024
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     114151024
Chromosome and associated proteins [BR:xco03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    114151024
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H JmjN PHD_2 PHD DUF4537
Other DBs
NCBI-GeneID: 114151024
NCBI-ProteinID: XP_027883704
Position
9:7573594..7626503
AA seq 1232 aa
MDTDKSMETVSAPNPGPTAPPDPGPVCLPALGSSPAPDHVPIQEPATAERPNIPVTSEQH
AAPDITPVLPVDLDGTSKSVPGFEPSALQQVGPGPSPLPPAAAKNPSCKIMTFRPTMEEF
KDFAQYIVYMESQGAHRAGLAKVIPPEGWKPRQSYDTIEDMVIPAPIMQVVTGQSGLFTQ
YNIQKKSMTVGEYRKLANSKKYCTPRHKDFDDLERKYWKNLTFVSPIYGADVSGSIYDEG
IHEWNIGHLNTLLDMVEQECGIVIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGQ
PKSWYSVPPEHGKRLERLAQGFFPGSSQGCDAFLRHKMTLLSPSILKKYGIPFDRITQNE
GEFMITFPYGYHAGFNHGFNCAESTNFATLRWVDYGKNAALCSCRKDMVKISMDVFVRCL
QPSRYELWKQGKDITVLDHLKATELSSPELESWRQHRITYRQNLLQKAMHKMKQVRRLKL
EEVKVLAEEGIELNAAEYQRQVEEREAQRKQEREERLAREAMLALEAMEREEQKAAEAAA
KAADSPVKALHTPLAEEQELDIKPPNFMEDIEKKKLKKQKRMSNIQGPISGFEEAFEQFA
KSANRNVDITSVKNEDMSMEINTAQQLTFTKMKMPKEVKKSRRHPLSKPPMRSPLSIVKQ
DPTTERELSSQMPMDSSMKKQEHLWRNHSPNFLAEKSFNAAVAGLEPYCAVCSLFCSYVK
PNRDVISLSPETSLPRHGISTRPLVPEMCFSVGAVNTEPPPTNYHIGEDGTSLLIKCKCC
AMQVHASCYGLKPESVRNSWTCARCTAEAWVVECCLCNLRGGALKRTTDNRWAHVICAIG
VPEARFVNAIDREPVDVSAVPETRKSLKCVFCHTTNPSPNRGACIQCTHENCATSFHVTC
AQIAGVVMKPADWPYVVSVTCHKHKKGIQMVNKVNKPRAAPKPAPQGLDLGLKVIGRKSD
SWYYHCTIIGIATQTFYEVNFEEGSYCDNVHPENIVSHDCLRNGPPDAGETIVVGTPDDE
NLNASFVKEHVHKLYQVEFQDQSQLMLKQSEIFQLNHELPKRVRARLALPTPQEEVRPAD
EAQAAKRRRLPSNSAGPNTPVPLSAPAQQNHSITTQPTIEPPSMIPTTNQEAPTPVNSFQ
TDAETPMDTGNNLAEPPPVSNPPLTQQPIPFQATLNSDPFLSVPSSSSPPPPPLPPPQHM
ANSYTPSSGYVSYMETLLHSRFPQDEAPGPVY
NT seq 3699 nt   +upstreamnt  +downstreamnt
atggataccgacaagtccatggagacggtgtcggctccaaaccctggccccactgcaccc
cctgatcctggtccggtctgtcttcctgctctcggctccagtccagctccagatcatgtt
cccatccaggagccagcaacagctgaaaggcccaatatcccggtgacctcagagcaacat
gcagctccagatatcaccccagttctgcctgtagacctagatgggacttccaaatccgtt
ccaggttttgagccatctgcactccagcaggtcggaccaggtccatcacctcttccccca
gctgctgccaagaaccccagctgtaagatcatgactttcaggcctaccatggaggagttt
aaagactttgcccaatatattgtgtacatggagagtcaaggagctcatcgtgccggcctg
gcaaaggtgattcctccagagggctggaaacctcgccaatcctacgatactattgaagac
atggtaatcccagcccccatcatgcaggtggtaactggtcagtctggtctgtttacccaa
tacaacattcagaagaaatccatgactgtgggtgaatatcgcaagctggccaacagtaaa
aaatattgcaccccacgccacaaagactttgatgacctggagaggaagtactggaagaac
ctgacatttgtatcacccatttatggggcagatgtcagtggctcaatctacgatgagggc
attcatgagtggaacattggtcacctcaacactctgctggacatggtggagcaggagtgc
ggtattgtcattgaaggagtcaacacaccgtacttgtattttggcatgtggaagaccacc
tttgcctggcacactgaggacatggacctctacagcatcaactaccttcactttgggcag
ccaaagtcctggtacagtgttcctcctgagcatggcaagagactggagaggcttgcacaa
ggtttcttccctggcagctcccaaggctgcgacgccttcctccgtcacaagatgacactg
ttatctccatccatcctgaagaaatatggcattccttttgacaggataactcagaatgaa
ggggagtttatgattacatttccatatggctaccatgctggcttcaaccacggcttcaac
tgtgctgagtccacaaactttgcaactctacgttgggtcgactatggaaagaacgccgca
ctgtgttcctgccggaaggacatggtgaaaatctcaatggatgtgtttgttcgctgcctg
caaccgagtcgctacgagctatggaaacaaggcaaagacatcacagtgctggatcatctg
aaggctacagagttgtccagtcctgaactggagagctggaggcagcacaggatcacctac
cggcaaaacctgctgcagaaagcaatgcacaagatgaagcaggttcggcgccttaagctt
gaggaggtgaaggtgctggcggaagagggaattgagctgaatgcagctgagtatcagcgt
caggtggaggagcgcgaggctcagcgcaaacaggaaagggaagagcgtttagccagggaa
gccatgttggcattggaggccatggaacgtgaggaacagaaggctgccgaggccgctgca
aaggcagcagacagtcctgtgaaagcattgcacaccccattagcagaagagcaagaactt
gatatcaagccaccaaacttcatggaggacattgagaagaagaagctgaaaaagcagaag
aggatgtcaaacattcaagggcctatatctggatttgaagaagcatttgagcagtttgct
aaatctgccaataggaacgtggatataacgtcggttaagaacgaagacatgagcatggaa
ataaacactgctcagcagctgaccttcactaagatgaaaatgccaaaggaggtgaagaaa
agtcggcgccatcctcttagtaaaccacccatgcgctcgcctctgtccatcgtcaaacaa
gacccgaccactgagagagagctgtcctctcaaatgccaatggatagcagcatgaagaaa
caggaacatttatggcggaatcactccccgaactttttggctgagaagtctttcaatgct
gccgtggctggacttgaaccatactgtgctgtctgttcacttttctgttcttacgtgaag
ccaaacagagatgttatcagtttgagccctgaaacctccctacctcgacatggtatttca
actcgaccactggtcccagagatgtgcttcagtgtaggagcagtcaacacagaaccacca
cccacaaattaccacatcggggaagatggaaccagtcttttgatcaagtgtaaatgttgc
gccatgcaagttcatgccagttgttacggtttgaagccagagtctgtcaggaattcctgg
acctgcgccaggtgtacagcagaggcctgggtagtggaatgctgcctctgcaacctgcgt
ggaggagcattgaagaggacaacagacaacagatgggcccacgtcatctgtgccatcggt
gtgccagaagctcgctttgtcaacgctatcgacagggagccggtggatgtcagtgctgtc
ccagaaacccgcaagagtttgaaatgtgtattctgccacacaacaaaccccagtccgaac
cgcggcgcctgcatccagtgcacacatgagaactgtgccacctctttccatgtcacatgc
gcccagattgcgggagtggtgatgaagcctgcagactggccctacgtggtgtcagtcacc
tgccacaaacataaaaagggcatccagatggtgaataaggtgaataagcctcgggcagcc
cctaaacctgctcctcagggcctagacctgggcctcaaggtgattgggcgtaaatccgac
agttggtactaccactgcaccatcattggcattgcaacgcagacgttctacgaggtcaac
tttgaagaagggtcatactgtgacaacgtgcacccagagaatatagtgagtcacgactgc
ctgcgtaacggtcctcctgacgcaggggagacgattgtggtcggtacaccggatgatgaa
aacctgaatgcttcctttgtcaaagagcatgtccacaagctctaccaggtggagtttcag
gatcaaagtcagctgatgctcaaacagtcagagatcttccagctgaatcatgaattacct
aaaagagttagagctcgactggctttacctaccccacaggaggaagttcgcccagctgat
gaagctcaagcagcgaagcgccgccggctgccctccaactcagctgggcctaacaccccg
gttccgctttcagcaccagcacagcagaatcacagtattaccactcaaccaaccatagag
cctccctccatgattcctactaccaatcaggaagcccccactcccgtcaacagctttcag
acggacgcagagaccccaatggacacaggcaacaacctcgctgaaccccctccggtctcc
aaccctccgctgactcagcagcccatcccttttcaggccactttgaactctgaccccttc
ctgtctgttccgtcctcctcctcaccaccaccaccaccgctaccaccaccacagcacatg
gccaacagctacacaccaagcagcggctacgtttcctacatggagacactcctccactca
cgttttcctcaggacgaagccccaggcccagtgtattag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (8)   
   Pfam (8)   
All databases (21)   

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