KEGG T05908: 114151751

Xiphophorus couchianus (Monterrey platyfish): 114151751

Entry

114151751         CDS       T05908

Name

(RefSeq) ATP-binding cassette sub-family A member 5-like isoform X1

K05648

ATP-binding cassette, subfamily A (ABC1), member 5

Organism

xco Xiphophorus couchianus (Monterrey platyfish)

Pathway

xco02010

ABC transporters

Brite

KEGG Orthology (KO) [BR:xco00001]
09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    114151751
09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:xco02000]
    114151751
Transporters [BR:xco02000]
ABC transporters, eukaryotic type
  ABCA (ABC1) subfamily
   ABCA5, 6, 8, 9, 10 subgroups
    114151751

SSDB

Motif

Pfam:

ABC_tran ABC2_membrane_3 AAA_21 RsgA_GTPase AAA_29 AAA_23 MMR_HSR1

Other DBs

NCBI-GeneID:

114151751

NCBI-ProteinID:

XP_027884934

Position

10:complement(12068244..12088479)

AA seq 1682 aa
MYFIPEASLSDTSRPYVIQMRNAGSMQPVFRRDAGVWSQTRSLLYKNLLIKWRTKQQSLQ
ELILPLLLLGLLILISTLNPHVYYGAINTAELPNDDFFQNLKGLAFTPITNITSHIMDEV
AHFISVQDRLEMFSSEEELENASLYESSSYIGVVFLDSSATSYTLRFPHNKLPLPSDYTE
SIASCYSSMLKCRAANYWYSGFTRLQSMIDAAIIEMQSKRPVRKELDIKVVMMGQPGSVE
VHKFPHALISIYLVLAFTPFVTFLIVNVAAEKEHRLKDTMTMMGLYDTAFWLSWGLLYAA
LVTAMSILMAIIATYTALFPNSDFFVIFPLIFLYGISSIFFSFMLTPLFKKPKFASTVGS
MLTVVFGCMSLFTVLMRDFPQPLVWLLCLLSPSAFSIGIAQVVYLEAQGDGAVFSSLTNG
PHPLYVPLVMLALDCILYLLLALYLDQVLPGDFGIKRSMLYFLKPSYWSKHRKRYVEVSS
VYNAEANGAPGGDECVEPVSPEFRGKEAIRISNICKVYKDKDTTVEALRGFTFDIYEGQI
TALLGHSGAGKSTLMNILCGICPPTNGSATIYGSPVAEIAEGSEMKQLVGICPQFNIIFD
VLTVEEHLRIFAAIKGIPPADIDAEVTRVLKDLDLEKIMTAQAKNLSGGQKRKLSVGIAI
LGDPKILLLDEPTAGMDPCSRHQVWSLLKSRRADRVIVLSTHYMDEADILADRKAVISQG
QLKCVGSSLYLKIKCGVGYHLRMSISEGCDTEKVASLMKQHVPKAKLSRQHDTELTFTLP
FENMNTFSGLFSELDCQPQLGIINYGVSMTTLEDVFLRLESEAEVDQADYSVFNREQAED
ECDNASLDDTDQRLITFSDSKSDSVSGHTLWRQQFSAVAWLHMLNMRREWKAFVYTLVLF
LLFLSSVLIVSLVTGNIQIHSQERQFLPTYLLTKNEAPHRYATSLLVKNSTNSDISDLIR
NLESQDIKVELMKQKDYMEAAPHSAAINVTGSKEGFRYTIAFNSTTIHSLPMAVNILSNA
LLRGLNGTGRIRTWTKPFDYQIPDATSYALVYIEAIMLGMLAVGMPAYFAMDHTRDREIK
CRSTLRISGLLPSAYWCGQAAVDIPFYYLILSSMNFILFCFHSGNLSTSSNLTAVVLCTV
GFGPAMILFTYVVSFGFTRVQSNRDFFSFICMMVCVVSASVVQLSFVNDNPELTRTLHNI
LCLFNPLYPLMGCLNCITKATFLPVLYEENFLWKSLLISVVAPYMQCILLLFLLRWLEIR
FGGRAMKSDQLCRISSKSKAKPERIPEEGQNEDEDVQMEKARVKEALTCQACEEKPVVVV
NNLRKQYKGRKEGFSFTQKTKVATKNISFCVRKGEVLGLLGPNGSGKSTVMHMLSGDTDP
TAGQILMGDYSTEFRPVENPLEHVGYCPQVNPLWPRITLQEHLEVYAAIKGLKGQEVPGI
IKRVSNALELREHLNKQAKNLSAGLKRKLCFALSMIGNPQIVLLDEPSSGMDPKSKQRMW
RAMRAAFRNHQRGAILTTHYMEEAEAVCDRVAIMVSGQLRCIGSIQHLKAKYGQGYSLEV
KLREELTGLQQVALLHKEILRIFPHAVRQESFTTLMVYKIPMEDVKSLAHSFSKLENAKQ
TFNFEEYNFSQSTLEQVFLEFAKEQENDEDEVGPLSTTFQWQRLQQDAAVSVNHVDSVVR
QL

NT seq 5049 nt +upstreamnt +downstreamnt
atgtatttcatacctgaggccagccttagtgacacatcccgtccgtacgtcatccagatg
aggaatgctggcagcatgcagccggtttttagaagagatgcaggagtttggtcgcaaaca
cgaagtcttctctacaagaacctgctcatcaaatggaggaccaagcagcagagcctccag
gagctgatcctccctctgctgctcctgggtctccttattctcatcagcaccctgaatcct
cacgtttattatggcgccatcaacacggctgagctgccgaatgacgatttcttccagaac
ctcaaaggcctggctttcacacccatcaccaacatcaccagtcacatcatggatgaagtg
gcccatttcataagtgtgcaggaccgcctggagatgttttccagcgaggaggaactggag
aacgccagcttgtatgagtcgtccagctacatcggcgtggtgttcttggacagctctgcc
acctcttacacactgcgctttccgcacaacaagctgcccctgccgagtgattacacagag
tctattgccagctgttacagcagcatgttgaaatgcagagctgcaaattattggtactct
ggtttcacccgcctccagtctatgattgatgccgctatcattgagatgcagtccaaacgg
ccagtgcggaaggagctggatataaaggtggtgatgatgggccagccgggctccgtggag
gtgcacaagtttccccatgccctcatctccatctacctggtgttggccttcacacccttc
gtcactttcctcatcgtcaacgttgcagctgagaaggagcatcggctgaaagacaccatg
accatgatggggctgtacgacacggccttctggttgtcatggggtcttctgtatgctgct
ctggtgactgccatgtccatcctcatggccatcatcgccacgtacacggcactgttcccc
aacagcgacttttttgtcatctttccactcatcttcctctatggaatatcatctattttc
ttctccttcatgttgactccgttgtttaaaaagcccaagtttgccagcaccgtgggctcc
atgctgacggtggtgttcggctgcatgtcgctgttcaccgtgctgatgagagacttccca
cagccgctggtttggcttctctgcctgctctctcccagtgcattctcaattggtattgca
caggtagtttacctggaagcacagggagatggtgctgtgttttcctccttgaccaatggg
cctcatccactctatgttcctctggtcatgctggctctggactgtattctttaccttctg
ctggctctctacttagaccaggtgctgcctggtgactttggaatcaagcgatccatgctg
tacttcctgaagccgtcttattggtccaaacacagaaagcgctacgttgaagtgagctca
gtgtacaatgccgaggcgaacggcgctcctggtggagatgaatgtgttgagcccgtttcc
cccgagttcagagggaaagaagcaatccgcatcagcaacatctgtaaagtgtacaaagac
aaggacaccacagtggaggctctgagagggttcacgtttgacatctacgagggtcagatc
acagctctgctgggacacagtggcgctggaaagtccacgctgatgaacatcctgtgcggc
atctgcccgcccaccaacggctcggccaccatctacggctctcccgtggcggagatcgca
gaaggctcggagatgaagcagctggtgggaatctgccctcagttcaacatcatctttgat
gtgctgactgtggaggagcacctcaggatattcgctgccatcaaagggatcccacctgca
gatattgatgctgaggtcaccagagtgctgaaggatctggacctggagaaaatcatgacg
gctcaggcaaagaatctgagtggaggccaaaagagaaaactctctgtgggcatcgccatc
ctcggagatcctaagattcttctcctggatgaacccacagcgggaatggacccctgctcc
agacaccaggtctggtctctgctgaagagccggcgggccgacagggtcattgtgctcagc
acacactacatggacgaggcggacatcctcgctgatcgtaaagctgtgatctctcagggg
cagctcaagtgcgtcggctcgtctctgtatctgaagatcaagtgtggcgtcggatatcat
ctccgaatgtcgatcagtgagggatgtgacacagagaaggttgcttcactgatgaagcag
cacgttcccaaagcgaagttgtcccggcagcacgacacagagctgactttcactctgccc
tttgagaacatgaacacattttcaggcttgttctcggagctcgactgccagccgcagttg
gggataattaactacggtgtctccatgactacgctggaagatgtttttctgcgtttggag
tcagaagctgaggtggatcaagctgactacagcgtgtttaaccgcgagcaggcggaggac
gaatgcgacaacgcgtctctggatgacacagaccagcggctcatcaccttctcagacagc
aagtccgattcggtgtccggtcacactctgtggcggcagcagttcagcgccgtggcctgg
ctgcacatgctcaacatgcgcagggagtggaaagccttcgtttacactctggtgctgttc
ctgctcttcctttcttcggttctcattgtgtcgctggtgacgggaaacatccagattcac
tcacaggagcgacagttcctccccacgtaccttttgacaaagaacgaagcgcctcacaga
tacgccacaagcctcctcgttaaaaactcaaccaactcggatatttccgacttgatccgc
aacctggaatcacaggatatcaaagtggaactgatgaaacagaaagactacatggaggcg
gctccgcacagcgctgccataaacgtcacagggtccaaagagggttttaggtataccatc
gctttcaacagcaccacaattcattccttacccatggccgtcaatattctgagcaacgcg
ctcctcagaggtctgaatggaacggggcggatccgaacctggaccaaaccgttcgactat
caaatcccagatgcgacgtcttacgccctggtctacatagaggccatcatgctgggaatg
ctggctgtcggaatgccagcgtattttgcaatggatcacactcgagatcgtgagataaag
tgtcgctccacgctgaggatctctggcctgctaccgtcagcctactggtgcggccaggcg
gcggtggacatccccttctactacctcatcctgtcctcgatgaacttcatcctcttctgc
ttccactctggaaacctgtcgacaagcagcaacctcaccgctgtggtcctctgcaccgtc
ggcttcggcccagccatgatcctcttcacgtatgtcgtttctttcggattcacacgagtg
cagagcaacagagacttcttctctttcatctgcatgatggtgtgtgtggtgtcggcctct
gtcgtgcagctgtcgtttgtgaacgacaaccccgaactgaccagaactctccacaacatc
ttatgtcttttcaaccccctgtatcctctgatgggttgcctcaactgcatcaccaaggca
acattccttcctgttctgtacgaggagaacttcttgtggaaaagtctgctcatttctgtt
gtagccccttacatgcagtgcatccttctgcttttcttgctccggtggttggagatccga
ttcggaggaagggcgatgaagagcgatcagctctgcaggatctcgtccaagtcgaaggcc
aaaccggagcggatcccggaggaagggcagaacgaggatgaggacgttcagatggagaag
gccagagtgaaggaggcactcacttgtcaggcttgtgaggagaaaccagttgtggttgtt
aataacctaagaaagcagtacaaaggcaggaaggaaggcttctctttcacccagaagacc
aaagtagccacaaagaacatctcgttctgcgttcgcaaaggggaagttcttggcctgttg
ggccccaacggatcaggaaagagcacggtcatgcacatgctgtcaggcgacactgacccc
acggctggtcagatcctgatgggagactacagcaccgagtttcgtccggtggaaaatcct
ctggagcacgtcggctactgtccccaggtgaaccctctgtggccccggatcaccttgcag
gaacacctggaggtctacgctgccatcaagggtctaaagggccaagaagtcccgggcatc
ataaagcgagtgtcgaacgctttggagctgagagaacatttaaacaaacaggccaagaat
ctctccgcaggactcaaacggaagctttgctttgctctgagtatgatcgggaatcctcag
attgtcctgctggatgagccgtcgtcaggaatggatcccaagtctaagcagcggatgtgg
agggccatgcgtgctgcgttcaggaaccatcagcgaggagccatcctcaccacacactac
atggaggaggcagaggctgtgtgcgaccgcgtcgccatcatggtttctggccagctgaga
tgcatcggctccatccagcacctgaaggcaaaatacggacaaggctacagtctggaggtg
aaactgagagaggagctgacgggactccagcaggtggcgctgctgcacaaggagatcctc
cgaatctttcctcacgccgtccgacaggagagcttcaccactctgatggtttataagatc
cccatggaggacgtcaagtcgttggctcactctttctccaagttagagaacgccaaacaa
acctttaactttgaggagtataacttctctcagtcaacactggagcaggtgttcctggag
tttgccaaagagcaggaaaacgacgaggacgaggtgggtcccctgagcacgaccttccag
tggcagcggctgcagcaggacgccgccgtctccgtcaaccacgtggacagcgtcgtgcgc
cagctctga

All links

Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (7)   
   Pfam (7)   
All databases (18)   

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