KEGG   Xiphophorus couchianus (Monterrey platyfish): 114152896
Entry
114152896         CDS       T05908                                 
Symbol
taf1
Name
(RefSeq) transcription initiation factor TFIID subunit 1 isoform X1
  KO
K03125  transcription initiation factor TFIID subunit 1 [EC:2.3.1.48 2.7.11.1]
Organism
xco  Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:xco00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    114152896 (taf1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:xco01001]
    114152896 (taf1)
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:xco03021]
    114152896 (taf1)
   03036 Chromosome and associated proteins [BR:xco03036]
    114152896 (taf1)
Enzymes [BR:xco01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.1  Transferring groups other than aminoacyl groups
    2.3.1.48  histone acetyltransferase
     114152896 (taf1)
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.1  non-specific serine/threonine protein kinase
     114152896 (taf1)
Protein kinases [BR:xco01001]
 Serine/threonine kinases: Other
  TAF1 family
   114152896 (taf1)
Transcription machinery [BR:xco03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     114152896 (taf1)
Chromosome and associated proteins [BR:xco03036]
 Eukaryotic type
  Histone modification proteins
   HATs (histone acetyltransferases)
    114152896 (taf1)
SSDB
Motif
Pfam: DUF3591 Bromodomain TBP-binding zf-CCHC_6 Cac1_C
Other DBs
NCBI-GeneID: 114152896
NCBI-ProteinID: XP_027886831
Position
11:complement(19903629..19918956)
AA seq 1979 aa
MSDSDSDEDQDRPFSLTGFLFGNINEDGQLEGDSVLDNESKKHLAGLGTLGLGSLITEIT
ANESENKEENRESVSVDSEGWVKSTDDAVDYSDISEVAEDETKKYHQAMGSLQPSRKTDD
EDDYDADCEDIDSKLMPPPPPPSLPTPAKKEESPAGTNVGEEGDGIILPSIIAPSSTADK
VDFSSSSDSESETERPCQGSGVLGPPDSLTLPLAGIMQKDAAKALPSVTQLFPEFKPGKV
LRFLRLFGPGKNMPSVWRSARRKKKRKHRDPQPGTPPPEEDTSEPSQEKKSGWIYEYALP
PPPEQCLSDDEITMMAPVESKFSQTSGDADKETESRPRVAEWRYGPAQLWYDMLGVPEDG
SNFNYGFKLKEDQPNEAEEQDMPKEVTEPPEEVLKEDDNMDVDDDGGDGDKVRRILENEL
FLMVTQLQWEDDIIWNGEDVKHKGTKTQRASLAGWLPSSMTRNANAYNAQQGLTRSNSQL
VPPIPLPIPKASSISGSKREKSSHDNQASLEEDCSWFSIFPIDNEELVYGRWEDNIIWND
QEMDHFLMPPVLTLDPNDENIILEIPDEKEEATSHSPSKENKKETAIKKSRILLGKTGVI
KDEPQQNMSQPEVKDPWNLSNDEFYYPKQQGLRGTFGGNIIQHSIPALELRQPFFPTHMG
PMKLRQFHRPTLKKYSFGALAQPGPHAVQPLLKHIKKKAKMREQERQAAGGGDMFFMRTP
QDLTGKDGDLILAEYSEEYPPLIMQVGMASKIKNYYKRKPGKDPGAPDCKYGETVYCHTS
PFLGSLHPGQLLQAFENNLFRAPIYLHKMPETDFLVIRTRHGYYIRELVDIFVVGQECPL
FEVPGPNSKRANTHIRDFLQVFIYRLFWKSKDRPRRIRMEDIKKAFPSHSESSIRKRLKL
CADFKRTGMDSNWWVLKPDFRLPTEEEIRAMVSPEQCCAYYSMLVAEQRLKDAGYGEKSF
FAPEEENEEDFQMKIDDEVRTAPWNTTRAFISAMKGKCLLEVTGVADPTGCGEGFSYVKV
PNKPTQQKDDKEPQPVKKTVTGTDADLRRLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDV
VRTMSTEQARSGEGPMSKFARGSRFSVAEHQERYKEECQRIFDLQNKVLESTEVLSTDTD
SSSAEDSDFEEMGKNIENMLQNKKTSSQLSREREEQERKELQRMLMGEESDRDNKGRKER
RKGLSSALSTSSHKDDDTSSVTSLNSSATGRRLKIYRTFRDEDGKEYVRCETVRKASVID
AYTRIRTTKDDEFIRKFALFDEQHREEMRKERRRIQEQLRRLKRNQEKDKIKGPPEKKSK
KVKERPDLKVKLKCGACGAIGHMRTNKFCPLYYQTNAPPSNPVAMTEEQEEELEKTVIHN
DNEELIKVEGTKIVLGKQLIESADEVRRKSLVLKFPKQQLPPKKKRRVGSAVHCDYLNKP
HKAIHRRRTDPMVTLSSVLEGIINDMRDHPNTYPFHTPVNAKVVKDYYKIINRPMDLQTL
RENVRKRMYPSREEFREAVELIVKNSATYNGAKHPITQVAQSMLDLCDAKLKEKEDRLVR
LEKAINPLLDDDDQVAFSFILDNIVTQKMMVVLDSWPFHHPVNKKFVPDYYKVIVNPMDL
ETIRKNISKHKYQNREIFLSDVSLIHANSIKYNGPDSPYTKTALEIVDVCKGTLAEYDEH
LTQLEKDISTAKEAALDAADLESLDPMTPGPYTPQPADLFDSVASGSLPREPSSLFSEGP
LLVAPEKRGGQGRHMRRPGEEDSDVDIEGFEEEDDGKPKTPAPAEDADGDLEDEDDEEML
LPPRRRLHDDDERGHGRSNHPAQSSVLYQDLLMSDGEDDASDEEGDNPFSGIQLSESGSD
SEREVDIRPAPPRRAQDTARMGMEQDESMMSYEGVGNEHMEDSNISYGSYEETESRSQMQ
PSSMGNGEEYGISEEEEEDEEDEARRRGPAVLSQAQLSEDEDSEEFRSIGGDSDMDSDN
NT seq 5940 nt   +upstreamnt  +downstreamnt
atgtctgattcagacagcgatgaagaccaagaccgacccttttccctcactggcttcctg
tttggaaacatcaatgaagatggccagttagagggagacagtgttctggacaatgagtcc
aagaagcatcttgctggtttggggacgttgggtctgggctctctcatcaccgagatcacg
gccaatgagagcgagaataaggaggaaaacagagaatctgtaagcgtggattcagagggt
tgggtgaaaagcacagacgatgcagtggactactctgacatcagtgaggttgctgaggat
gagactaaaaagtaccaccaggcaatggggtctttgcagcccagcaggaaaacagatgat
gaggatgattatgatgccgactgtgaggatattgactcaaagcttatgcctcctccacca
ccgcctagtcttcctactccagctaagaaagaagaatcgcccgccggtacaaatgttggg
gaagagggcgatggcatcatcttgccctccattattgcaccatcctccactgccgataag
gtagatttcagcagctcttcagactctgagtcggagacggaacggccctgccagggttca
ggagttctagggcctccggacagtctcacccttcctcttgcggggatcatgcagaaggat
gctgccaaggcgttaccaagtgtcacacagctctttccagagtttaagcccggcaaggtt
cttaggtttttacggctgttcggtcctggtaagaacatgccttcagtttggaggagtgcc
cgcaggaagaagaagcggaaacacagagaccctcagccggggactcctccgccagaggaa
gacacctcagaaccaagtcaggagaaaaagtctggatggatttatgagtacgcactccct
ccacccccagaacagtgtctctctgacgatgagataaccatgatggctccagtggaatca
aagttctcgcagacatccggggacgcggacaaagagacagagtctcgacctagagtagca
gaatggagatacggtccggcccagctctggtacgacatgctgggagtacctgaggacgga
agcaacttcaactacgggttcaaactcaaagaagatcagcccaatgaggctgaagagcaa
gatatgcccaaagaagtaacagaacctcctgaagaggttctgaaggaagacgacaacatg
gatgtagatgacgatggtggcgatggagataaagtgaggcgaattctggagaacgaactt
ttcctaatggtcactcagctccagtgggaggacgatatcatctggaacggagaagatgta
aaacacaagggaaccaagactcagagagccagcttggcaggatggctcccctccagcatg
acccgaaatgctaacgcttataatgcccagcagggtctgacccgaagcaattcccagctg
gtcccaccgatacctctgcctattccaaaagcttcctcgatctctggctcgaagcgggaa
aaaagcagccacgacaatcaagcctctctagaagaagactgttcgtggttttccattttc
cccattgacaatgaggagctggtgtacggccgctgggaagacaacatcatctggaacgac
caggagatggatcactttctcatgccgccggtccttacactggatcccaatgatgagaat
ataatactagaaattcccgatgaaaaggaggaggcaacgtctcattcgccgtcaaaggag
aataagaaggagacggcaatcaagaagagtcggattctgttggggaagaccggcgtgatt
aaagacgagccacaacagaacatgtcccaacctgaagttaaagatccctggaacctctcc
aacgatgagttctactatcccaaacagcaaggcctgagaggaacgtttggtggcaacatt
attcagcactccattccagcacttgagctgaggcagcccttcttccccactcacatgggt
ccaatgaagcttcggcagttccatcgaccgaccctgaagaaatactcttttggagcttta
gcgcagccgggtccgcacgctgttcagccgctgctcaaacacatcaagaagaaagccaag
atgcgagagcaggagcggcaggcggcaggcggcggagacatgttcttcatgcgaacgccg
caggacttgaccggtaaagacggggatctgatcctggcggagtacagcgaggaataccca
cctctcatcatgcaggttggcatggcgagcaagatcaaaaactactacaaaaggaaaccc
ggaaaggatccaggagcgcctgactgtaaatatggagaaacagtttattgccatacctcc
cctttccttggttctcttcatcctggtcagcttcttcaggcgtttgaaaacaacctcttc
cgtgctccaatctacctgcacaagatgccagagacggattttctcgtcatacgaactcga
cacggctactacatcagggagctcgtggacatttttgtcgtcggtcaggagtgcccgttg
tttgaggttcctggtccaaattctaaacgtgccaatactcacatcagagacttcctgcag
gttttcatttaccgcttgttctggaagagcaaagaccgtcctcggagaatccgcatggag
gatataaagaaagcttttccctcacactcagagagcagcatcaggaagcggctcaagctc
tgcgctgacttcaagcgtacaggaatggactcaaactggtgggtgctgaagcctgacttc
aggttgcccactgaagaagaaatcagagccatggtttctccagagcagtgctgcgcttac
tacagcatgctggttgcggagcagaggcttaaggatgctgggtatggtgagaagtctttc
tttgctccagaagaggagaacgaagaggattttcaaatgaagatcgatgacgaggtccgg
acggcaccgtggaacacaaccagagccttcatctccgccatgaaggggaagtgtctgttg
gaggtcacgggagtggcagatcccactggctgtggagaaggtttctcatatgtgaaagtg
ccgaacaagcccactcaacaaaaagatgacaaagagccacagcctgtaaaaaagactgtg
accggaacggacgctgacctgaggagactctctctgaagaacgccaagcagctccttcgc
aaatttggtgtgccagaggaagagatcaagaagctttcccgttgggaggttattgacgtg
gtgaggaccatgtccacggagcaggcacgttcaggcgaaggcccgatgagcaagttcgct
cgaggctctcgcttctctgtcgccgaacaccaggagcgctacaaggaggagtgtcagagg
atctttgacttgcagaacaaagtgttggagtccacagaggtgttgtccacagacacagac
agcagttcagctgaagatagcgactttgaggagatgggtaagaacattgagaacatgctg
cagaataagaagaccagctcacagctttcccgcgagagggaggagcaggaaaggaaggaa
ctgcagaggatgctgatgggcgaggagagcgatcgtgacaacaagggacgcaaggagcgc
cgcaaaggcttgtccagtgccttgtccaccagctcccacaaagacgacgacacgtcctcc
gtcaccagcctgaactcgtcggctacggggcgacgactcaaaatctatcgcaccttcagg
gacgaggacggcaaagaatacgtgcgctgcgagacggttcgtaaagcgtccgtcatcgac
gcctacacccggatcagaaccaccaaggacgatgagttcatacgaaagtttgccctcttc
gatgagcagcacagagaggagatgaggaaggagcgccggcgtattcaagagcagctcagg
aggctgaagagaaaccaagagaaagacaagatcaaaggacctccggagaagaagtccaag
aaggtcaaggagagaccagacctcaaggtaaaactgaagtgcggcgcgtgtggagccatt
ggacacatgagaaccaacaaattctgcccgctgtactaccaaaccaacgccccaccctcc
aacccggtcgccatgacggaagagcaggaggaggagctggaaaagactgtgatccacaac
gacaacgaggaactcatcaaggtggagggcactaagattgtactgggcaagcagctcatt
gaaagtgccgatgaggtgcgcagaaagtctttggtgctcaagtttcccaagcagcaacta
ccaccaaagaagaagagacgcgttggcagcgccgtccattgtgattacctcaataaacca
cacaaggcaatccaccgcagacgcaccgaccccatggtcaccctgtcatcggtgctggag
ggaatcatcaacgatatgcgggatcaccccaacacgtaccccttccacacaccggtcaac
gccaaggtcgtcaaggattactacaagataatcaatcggcccatggacctgcagacgctg
agggagaacgtgcggaagcggatgtacccgtcgagggaggagttccgggaggccgtggag
ctcatcgtcaaaaacagcgccacatacaacggagcgaaacatcccattacacaagtggcg
cagtccatgcttgacctgtgtgatgctaagctgaaagagaaagaggatcggctggtgagg
ctggagaaagcgatcaacccccttctggatgatgacgaccaggtggcgttttccttcatc
ctggacaacattgtgactcagaaaatgatggtggttcttgattcgtggccgtttcaccat
cctgtcaataaaaagtttgtgccggattattataaggttattgtaaatcctatggatctg
gagactatccggaagaacatctccaagcataaataccagaatcgggaaatattcctttca
gatgtcagtctcatccacgccaacagcatcaaatacaatggtccagacagtccgtacacc
aagactgccctggagattgtagatgtgtgcaaaggaaccttagcagagtacgatgagcac
ctgacccagctggagaaggacatctctacagccaaggaggcagctctggacgcagcagac
ttggagagcctggacccaatgacacccgggccgtacaccccgcagcctgctgatctgttt
gacagcgtggcttcagggagtctacccagagagcccagcagccttttctctgagggacct
ctgttggttgctccagagaagagaggggggcagggacggcacatgaggagaccaggagag
gaggactcagatgtggacatcgagggcttcgaggaggaagatgatgggaaacccaagact
cctgctcctgcagaggacgccgatggagatctggaggacgaagacgatgaagagatgttg
ctgccgcctcgcaggcggctgcacgacgatgacgagcgaggacacgggcggtcgaaccac
ccggctcagtccagtgtgctgtaccaggatctgctcatgtctgatggagaggatgatgcc
agcgacgaagaaggggacaacccgttctctggcattcagctatcagaaagcggcagcgac
tctgagagggaggtggatatccgacccgcgcctccgcggagagctcaggatacggcccgc
atgggcatggagcaggatgagagcatgatgtcgtatgaaggggttggtaatgaacacatg
gaagacagcaacatcagctacggcagctacgaggagacggagagtcgcagtcaaatgcag
ccgtccagcatgggaaacggcgaagagtacggcatcagcgaggaggaggaggaagacgag
gaagatgaagcgcggagaagaggcccagctgtcctgtcccaagcccagctcagcgaagac
gaagacagcgaggagttccgatccatcggaggagacagtgacatggactctgataattag

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (5)   
   Pfam (5)   
All databases (25)   

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