KEGG   Xiphophorus couchianus (Monterrey platyfish): 114153641
Entry
114153641         CDS       T05908                                 
Symbol
irf1
Name
(RefSeq) interferon regulatory factor 1 isoform X1
  KO
K09444  interferon regulatory factor 1
Organism
xco  Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04625  C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:xco00001]
 09150 Organismal Systems
  09151 Immune system
   04625 C-type lectin receptor signaling pathway
    114153641 (irf1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:xco03000]
    114153641 (irf1)
Transcription factors [BR:xco03000]
 Eukaryotic type
  Helix-turn-helix
   Tryptophan clusters interferon-regulating factors
    114153641 (irf1)
SSDB
Motif
Pfam: IRF
Other DBs
NCBI-GeneID: 114153641
NCBI-ProteinID: XP_027888121
Position
11:complement(4525617..4528895)
AA seq 291 aa
MPVSRMRMRPWLEKMIDSNTISGLQWVDKDKTMFSIPWKHAARHGWELDKDACLFKEWAI
HTGKYTKGQSSDPKTWKANFRCAMNSLPDIEEVKDKSINKGHQAMRVFRMLPAVSKNQEK
RSKSRDTKSRKKRQAVKEEMESDYSDTQSPVNMCPPEETISTQENTVDSTVNMEHGGFDC
TGEVPELSLLVEIETDPLQNHFSHRFEVSPEHNLEYDYQQDVIEICKILEKESQWMVNTD
SRGFLHNEARTSPGSNWSESSSELEDTPQYTTLGSDFQSNSYEFWNSFSPI
NT seq 876 nt   +upstreamnt  +downstreamnt
atgcctgtgtctagaatgagaatgaggccgtggctggagaagatgatcgattcaaacacc
atcagcgggctgcaatgggtggataaggacaagacaatgttctctattccatggaagcac
gcagctcgacatggttgggagctcgacaaagacgcctgtctgttcaaagaatgggccatc
catacaggtaaatacacgaagggacagagtagcgatcccaaaacttggaaagccaacttc
cgatgtgcaatgaactccctgcctgacattgaggaggtgaaagacaaaagcatcaacaaa
ggccaccaagccatgcgggtcttcagaatgctgcctgctgtctcaaaaaaccaagagaaa
aggagcaaatcaagggacaccaagtcgaggaagaagagacaagcagttaaggaagagatg
gagtcagactacagcgacactcagtctcctgtaaacatgtgtccgcctgaggaaaccatc
tccactcaggaaaacacagtagacagcacagtaaacatggagcatggaggattcgactgt
acaggtgaagttccagagttgtccctcttagttgagattgagacagatcctcttcagaac
cacttttcccacagatttgaggtttctcctgaacacaaccttgaatacgactatcaacaa
gacgtcattgagatttgcaagatactggagaaagaatcacagtggatggtcaatacagac
agcaggggattccttcacaatgaagcacgcaccagtccagggagtaattggagtgagtct
tcctcagagttagaagacacaccacagtacacaacactgggctcagacttccagagcaac
tcgtacgaattctggaacagcttttccccgatttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

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