KEGG   Xiphophorus couchianus (Monterrey platyfish): 114155780
Entry
114155780         CDS       T05908                                 
Name
(RefSeq) gastrula zinc finger protein XlCGF57.1-like
  KO
K09228  KRAB domain-containing zinc finger protein
Organism
xco  Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:xco00001]
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    114155780
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:xco03000]
    114155780
Transcription factors [BR:xco03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 others
    114155780
SSDB
Motif
Pfam: zf-H2C2_2 zf-C2H2 zf-C2H2_4 zf-C2H2_jaz zf-met zf-C2H2_6 C1_4 zf-LYAR LIM zf-BED zf-UBR
Other DBs
NCBI-GeneID: 114155780
NCBI-ProteinID: XP_027891669
Position
13:19632375..19635981
AA seq 574 aa
MSSVQRQRKFINEPLTAAEETFTEFKEIIVKSEEEMDDHRRLLDFSRRPQIILHRIDLPQ
NCVCKKEEDFTEFSNQDGNSAIDKEEPEPFKIKHEQEESEHQQFKEEENQLCISQDEEHL
MLKQETGDILVTPSNVQKISNETEPNRSQLIFHFSSTMEGPVVENQDQEGNNSGDPGEKR
DKEQKQNKRCQKTKQQKGTTEGPKHKKHKKTHLDQNVYSCEFCHQIFSQKGNLMTHVRIH
TGEKRFTCLTCGKSFTQKGNLISHMKSHTGEKPFTCRTCEKKFSNKRNLTIHMRTHTGEK
PFSCVNCQKHFRSASCLSSHMKVHMVEKPFTCTTCGKSFSRKDHLSNHMKLHTGEKPFTC
TTCGKRFRIKSDLTIHTRIHTGEKPFSCGTCGKSFRSTSRLTSHMRIHMAEKPLTCMTCG
KSFTRTDHLVNHMRIHTGEKPFTCMTCGKSFRIKFDLTIHMRIHTGEKPFSCGTCGKSFR
STSRLTSHMRIHLTEKPFTCITCEKSFTRKDHLVKHMNLHIGEKPFTCMTCGKGVIHKNN
LASHVIGHTSVEHFSCGICGKSFTYENGLPIHED
NT seq 1725 nt   +upstreamnt  +downstreamnt
atgtcttcagttcagcgtcagagaaagtttatcaacgagccgttaactgctgctgaagaa
acattcacagagtttaaagaaatcatcgtcaaatccgaggaagagatggatgatcatcgc
agactgctggatttctcccggaggccccagataatcttacaccgaatagatctcccacaa
aattgtgtgtgtaaaaaggaggaagatttcactgagttcagcaaccaggatgggaattca
gctatagataaagaggaaccagaaccttttaaaataaaacatgagcaagaggaatcagaa
catcaacagttcaaagaagaagaaaatcagctttgcataagtcaggatgaagagcatctt
atgttgaaacaggaaactggagacattttggtgactccttctaatgtacaaaaaatcagt
aatgaaacagaaccaaataggagccaacttattttccacttttcaagcactatggagggt
ccagtagttgagaaccaggatcaggaaggaaacaattctggagacccaggagaaaagaga
gacaaagagcagaaacaaaacaagagatgtcagaaaaccaaacagcaaaaaggaactacc
gaaggtccaaaacataaaaagcacaaaaaaactcacctggaccaaaatgtgtattcctgt
gaattttgtcatcaaatcttttctcaaaaaggtaacttgatgacacacgtgaggattcat
actggggagaagcgtttcacatgtcttacttgtggaaaaagtttcactcaaaaaggtaat
ttaatttctcacatgaaaagccacactggagagaagcctttcacatgtagaacttgtgaa
aaaaagtttagtaacaaaagaaatttaactattcacatgaggactcatacaggcgagaag
cctttctcttgtgtgaattgtcaaaaacattttagaagcgcatcttgtttatcttctcac
atgaaggttcatatggtcgagaagcctttcacatgtacgacttgtggaaaaagtttcagt
cgaaaagatcatttaagtaatcacatgaagcttcacacaggtgagaagccattcacatgt
actacttgtggaaaacgtttcagaatcaaatctgatttaaccattcacacaagaattcat
acaggtgagaagcctttctcatgtggaacttgtggaaaaagtttcagaagcacgtctcgt
ttaacttctcacatgaggattcatatggctgagaagcctttgacatgtatgacttgtgga
aaaagtttcactcgaactgatcatttagttaatcacatgagaattcacacaggtgagaag
cctttcacatgtatgacttgtggaaaaagtttcagaattaaatttgatttaactattcac
atgagaattcatacaggtgagaagcctttctcatgtggaacttgtggaaaaagttttaga
agcacatctcgtttaacttctcacatgaggattcatttgaccgagaagcctttcacatgt
ataacttgtgaaaaaagtttcacacgaaaagatcatttagtcaaacacatgaaccttcac
ataggtgagaagcctttcacatgtatgacttgtggaaaaggagtcattcacaaaaataat
ttagctagtcatgttataggtcacacaagtgtggagcatttctcatgtgggatttgtggg
aaaagtttcacctatgaaaatggtttacctattcacgaggactaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (11)   
   Pfam (11)   
All databases (20)   

Download RDF
DBGET integrated database retrieval system