KEGG   Xiphophorus couchianus (Monterrey platyfish): 114155782
Entry
114155782         CDS       T05908                                 
Name
(RefSeq) gastrula zinc finger protein XlCGF57.1-like
  KO
K09228  KRAB domain-containing zinc finger protein
Organism
xco  Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:xco00001]
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    114155782
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:xco03000]
    114155782
Transcription factors [BR:xco03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 others
    114155782
SSDB
Motif
Pfam: zf-H2C2_2 zf-C2H2 zf-C2H2_4 zf-C2H2_6 zf-Sec23_Sec24 zf-C2H2_jaz DUF2180 zf-met zf-C2HC_2 zf-C2H2_3rep
Other DBs
NCBI-GeneID: 114155782
NCBI-ProteinID: XP_027891672
Position
13:18844269..18849541
AA seq 569 aa
MSLVHPEREFMNEQLTSAEETPAEFKTIIVKAEEEVDDQRRLLDLTRAPQIILHRVDFLH
PDDVKEQRLFNQENISNLDQEEPEAPRIKEEQEELPCQQIKEEPGDLEHQELKEEQESQE
IEQVVVKWETDVFMVTPTNNHEESERDEELQQNNDEHHHSTIQNQLNETQDKNVFSCRIC
DETFTENILLMKHLKIHTDEGLFSCKICGKTASRKCHLDVHMRTHTGEKPFLCNLCGKSF
SQKGHLTIHTRTHTGERPFSCKICEKGFIEKGLLTDHMSVHTGERPFLCKVCGKDFRLKA
DLRRHTMTHTGGKRFACVICFKTFCRKGRLTLHMESHTGEDPFSCKICGEGFCEKDFLTE
HMKIHTGDRPFPCKICGKSFNRKSSLTVHVRTHVAEKPFSCEICGKGFCAKAFLNLHMRV
HTGDRPFSCVICGKTYTQKNHLSVHLRTHTSDRPFSCTLCGKSFQYKQSLTEHLTIHKGE
RPFLCKVCGKRFREKCHLTVHMRIHTGEKPFSCNVCDKRFCKKCHLTVHMRIHTGEKPFS
CNICEKRFCKKCSLILHMRNHASENSVSC
NT seq 1710 nt   +upstreamnt  +downstreamnt
atgtctttagttcaccccgaaagggagttcatgaacgaacagttaacttccgccgaagaa
acaccagcagagttcaaaacaatcatcgtaaaggccgaagaggaggtggatgatcagcgc
aggctgctggatttaacccgagcaccccagattattttacaccgagtagacttcctgcat
cctgatgatgtgaaggagcagcgtctgtttaaccaagagaacatctctaatttggaccag
gaggaaccagaagccccgaggataaaggaagagcaagaggagctgccatgtcagcagata
aaagaagagccgggggatctggaacatcaggagttaaaagaagagcaggagagtcaggaa
atagagcaagtcgtggtgaagtgggagactgatgtcttcatggtgactcctacaaacaat
cacgaagaatcagaaagagatgaagagctgcagcaaaataatgatgagcatcatcatagt
acaatacaaaatcaactcaatgaaactcaagataaaaatgtgttttcttgtagaatttgt
gatgaaacgtttactgaaaacattttattgatgaaacacttgaaaattcacacagatgag
ggacttttttcatgtaagatatgtggaaaaactgccagtcgaaaatgtcatttagatgtt
cacatgagaactcacacaggtgagaagccattcttgtgcaacctttgtggaaaaagtttc
agtcagaaaggacatttaaccattcatacaagaactcacacaggtgagagacctttctct
tgcaagatttgtgaaaaaggattcattgaaaaaggtttgttgactgatcacatgagcgtt
cacacaggcgagaggccttttctgtgcaaggtttgtggaaaagatttccgtctaaaagct
gatttacgccgccacacgatgacccatactggtgggaagcgtttcgcttgtgtgatttgc
ttcaaaacattttgtcgtaaaggccgtttgactcttcacatggaaagtcacacaggtgaa
gaccctttctcgtgtaagatttgtggagaaggtttctgtgaaaaagattttttaactgaa
cacatgaaaattcacactggtgacaggcctttcccttgtaagatttgtggaaaaagcttt
aatcgaaaaagtagtttaaccgttcacgtgagaactcacgttgcagagaagcctttctcc
tgcgagatttgtggaaaaggcttctgtgcaaaagcttttcttaatcttcacatgagagtg
cacacaggtgacaggcctttttcttgtgtcatctgtggaaaaacctacactcaaaaaaat
catttatctgttcatttgagaactcacacaagtgacaggcctttctcatgcacactgtgt
gggaaaagtttccaatacaaacagtctttaacggaacacctgactattcacaaaggtgag
cggccattcttgtgcaaggtgtgtggaaaacgtttccgtgaaaaatgccatttaaccgtc
cacatgagaattcacacgggtgaaaaacctttctcatgcaatgtttgtgataagcgtttc
tgtaaaaaatgtcacttaactgttcacatgagaattcacacaggggagaagcctttctca
tgcaatatttgtgaaaaacgtttctgtaaaaaatgtagtttaattcttcacatgagaaat
catgcgagtgagaattctgtctcttgctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (10)   
   Pfam (10)   
All databases (19)   

Download RDF
DBGET integrated database retrieval system