KEGG   Xiphophorus couchianus (Monterrey platyfish): 114156547
Entry
114156547         CDS       T05908                                 
Symbol
rfx5
Name
(RefSeq) DNA-binding protein RFX5
  KO
K08061  regulatory factor X 5
Organism
xco  Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:xco00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:xco03000]
    114156547 (rfx5)
Transcription factors [BR:xco03000]
 Eukaryotic type
  Other basic domains
   RF-X
    114156547 (rfx5)
SSDB
Motif
Pfam: RFX_DNA_binding RFX5_N Pox_D5 Cdc6_C UPF0449 CCDC138_C
Other DBs
NCBI-GeneID: 114156547
NCBI-ProteinID: XP_027892849
Position
13:20213285..20226467
AA seq 691 aa
MSEDQQHQRAHASDRDKCGLEPGEGDTEPSILLQKLSSNISKNVQTKVDQILQDVQRFSD
NDKLFLYLQLPSGPSSGDKTGGDPSSFNTADQLHTCYWIRSHLEEHSDTCLPKQDVYETY
RRYCENLQHRPLSAANFGKIIRDIFPNIKARRLGGRGQSKYCYSGIRRKTVLNMPLLPNL
DLKNDPSELTELVQTYKQEVTEAACELICDWAQKILKRSFDTVVEIARYLIQEHIVNPRC
NQAKLVTSAALAGGPAKTHKVIKKTPVMSPADGDGAADQKKEQGDLCSSSPKMSSGDKST
SAVPKPSSADAPPPLPPPPLPHSSSTSSASLQPAVDAFMKQLPRILPRSTVPDKSFSVRS
AVPPPVPVDAAVGVPSAHGGTAAITAPANSGGVKVITMTTLPQQQGRTLPVMILPQSCLS
FEAEKVAPPPSLSAQQHTVAAPTSVVQKARGAAAKRPQEGEVSSIGVSAASSLSTSPVKR
KRGRPRKPRPEDAVPSPSPQPPPPQPPIITPLTGGVIQKATSSLSSAAQTVVELVIQEPP
GLVLGQLPAMSDPAHRLVDPRGVVVQCQPGGAADPDSQVRPVLLFHSPGNPSWERTPMVE
VIQKAPRPNNNSGGGGGFGMAPFPPLPAATLHEEQGEVEITLTPVEVHVNPPPASTSSAA
PASSLSISSTMVVKIEEEEVDNSPSPQKGGH
NT seq 2076 nt   +upstreamnt  +downstreamnt
atgtcagaggaccagcagcaccagcgggcccacgcctccgacagggacaagtgcggcctg
gagccgggggagggcgacacagagcccagcattttgctgcaaaagctgagcagcaacatc
tcaaagaacgttcagaccaaagtggatcaaatcttgcaagacgttcagcgcttctcagac
aatgacaagctgttcctgtacctccagctgccctcggggcccagctccggagacaaaact
ggtggcgacccgagttcattcaacacagctgaccagctgcacacctgttactggatccgg
agtcacctggaggagcattcagacacctgtctgcccaaacaggacgtctacgagacgtac
aggaggtactgtgagaacttgcagcatcgacccctgagcgctgccaactttgggaagatc
atcagagacattttccccaacatcaaggcgaggcgactcggcggcagaggacagtccaag
tactgttatagtggcatcaggaggaagacggttctgaacatgcctctgctgcccaacctg
gacttgaagaacgacccgtcggagctgaccgagctggtccagacctacaaacaggaagtg
acggaggcggcctgcgagctgatctgtgattgggcccagaagatcctgaagcgatccttc
gacacggtggtagagatcgctcgctacctgatccaggagcacattgtcaaccctcgctgc
aaccaggccaagctcgtcacgtccgctgcgctcgcaggcggtccagctaaaacccataaa
gtcataaagaaaactcctgtgatgtctccagctgacggagacggagccgcagaccagaag
aaggaacagggagacctgtgctcgtcctcacccaagatgtcttctggggacaaatccaca
tcagccgtccccaagccttcctcagcagacgccccgcctcctcttcctcctcctcctctt
cctcattcctcctctacctcttctgcctctctgcaaccagcagtggatgcgttcatgaag
cagttacccagaatccttcctcgcagcaccgttcccgacaagagcttctccgtccgctcc
gctgtgcccccaccggtgccggtggacgccgccgtcggcgtgccgtctgcacacggaggc
accgccgccatcacagctcctgccaacagcggtggggtgaaggtcatcaccatgacgacg
ctgccccagcaacagggcaggacgctgccggtgatgattcttcctcagagctgtttgtcc
tttgaggcagagaaggtagctccacccccttctctgtctgcccagcagcacaccgtggcg
gcgccgacctcggtggtccagaaagctcggggcgccgccgccaagcgaccccaggagggg
gaagtgtcgtccatcggtgtctcagccgcttcctctctcagcacttctccggttaaacgg
aaacgtggccggccgaggaaacccagaccggaagacgcggttccatccccatctcctcag
ccgccgccgcctcagccgccgatcatcacgccactgaccggcggcgtcatccagaaggcg
acctcctcgttgtcgtccgccgcgcagacggtggtggagctggtgatccaggagccgccg
gggctggttctgggtcagctgcccgccatgtccgacccggcccaccggctggtggacccc
cgtggcgtggtggtgcagtgccagccgggcggcgccgccgacccggacagccaggtgagg
cctgtgctgctcttccacagtcctgggaaccccagctgggagcggacccccatggtggag
gtgatccagaaggcgccgaggccgaacaacaacagcggtggcggcggcgggttcggcatg
gctccgttcccgccgctgcccgcggccacgctgcatgaggagcaaggcgaggtggagatc
acgctgacgccggtggaggttcacgtcaacccgccacctgcctccacctcctctgctgct
cctgcctcctccctctcaatctcctccaccatggtggtaaagattgaggaggaggaagta
gacaacagcccctccccccagaaaggaggacattag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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