KEGG T05908: 114159802

Xiphophorus couchianus (Monterrey platyfish): 114159802

Entry

114159802         CDS       T05908

Symbol

grin2b

Name

(RefSeq) glutamate receptor ionotropic, NMDA 2B

K05210

glutamate receptor ionotropic, NMDA 2B

Organism

xco Xiphophorus couchianus (Monterrey platyfish)

Pathway

xco04020

Calcium signaling pathway

xco04080

Neuroactive ligand-receptor interaction

Brite

KEGG Orthology (KO) [BR:xco00001]
09130 Environmental Information Processing
  09132 Signal transduction
   04020 Calcium signaling pathway
    114159802 (grin2b)
  09133 Signaling molecules and interaction
   04080 Neuroactive ligand-receptor interaction
    114159802 (grin2b)
09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:xco04040]
    114159802 (grin2b)
Ion channels [BR:xco04040]
Ligand-gated channels
  Glutamate (ionotropic)
   114159802 (grin2b)

SSDB

Motif

Pfam:

NMDAR2_C Lig_chan Lig_chan-Glu_bd SBP_bac_3 ANF_receptor

Other DBs

NCBI-GeneID:

114159802

NCBI-ProteinID:

XP_027897781

Position

16:19441787..19620071

AA seq 1707 aa
MRLWLAKHEVFLSHSYIMPLRGRCSSSLPHQHAGAHFSPRMVAQVQHGARTLHPPPPPSV
HRTTGTSLCLPLLFLLLCLLHLPPACHSRREKGGGGGGGHYMPIPQPPPHHMALPNILRG
LSIAVVLVGNSSEVALAGAREKEDFLHIAPNVEVLTMNETDPKSIIKSICDLMTEHWLQG
VVFGDDTDQEAIAQILDFISAQTHIPILGVRGGSSMIMAAKDDNSMFFQFGPSIEQQASV
ILNIMEEYDWYIFSIVTTYYPGYQDFVTKIRNTIENSFVGWELEEVLLLDMSVDDGDSKI
QNQLKKLQSPVILLYCTKEEANTIFEVAHSVGITGYGYTWIVPSLVAGDTVVVPAEFPTG
LLSVSYDEWDYGLEARVRDGVAIITMATSTMMMDRGPHTLLKSECHGAPEKKTPISGNPN
EVLRYLMNVTFEGRNLSFSEDGYQMHPKLVIILLNKERQWDRVGKWENGSLSMKYHVWPR
YELYGGAATREDDHLSIVTLEEAPFVIVEDVDPLSGTCMRNTVPCRKQIKTLNQTKETGI
YIKRCCKGFCIDILKKIAKSVKFTYDLYLVTNGKHGKKINGTWNGMVGEVVLKNAHMAVG
SLTINEERSEVIDFSVPFIETGISVMVSRSNGTVSPSAFLEPFSADVWVMMFVMLLLVSA
VAVFVFEYISPVGYNRCLADGREPHGPSFTIGKAIWLLWGLVFNNSVPVQNPKGTTSKIM
VSVWAFFAVIFLASYTANLAAFMIQEEYVDQVTGLSDKKFQSPNKFSPPFRFGTVPNGST
ERNIRNNYPEMHTYMTAFHQRNVNEALQSLKAGKLDAFIYDAAVLNYMAGRDEGCKLVTI
GSGYIFATTGYGIAIQKESGWKRHVDLAILQLFGDGEMEELESLWLTGICHHEKNEVMSS
QLDVDNMAGVFYMLGAAMALSLITFICEHWFYWQLRFCFMGVCSGQPGFVFSVSRGIYSC
IHGVQIEEKSSSALNSPSATMNNTHSNIMRLLRTAKNMASLSGVNGSPHSALDFIRRDSS
VYDISEHRRSLAGHSDCKPPYMPEDNMFSDYISEVERTFGNLHLKDSNLYQDHYLHHHGS
TPGLTGPPPNRPHSLGSASSLEGGMFDCDSLGGGVAPIFTTQPCSALTHRNMSKFDLLSG
QTPPSGQSFKGGLPDVYGKFSFKGGASSSTYIPGPSYCGGRGDDDGNIRSDVSDISTHTV
TYGNLEGNAKKRKQYRDSLKKRPASAKSRRELDEIELGYRRKPYHISHHHYHSQRSVSPP
LLPSERKRGGGGGNNNGNSYLFREKESVRDFYLDQFRPKEGVPQWEHVDLTEGPGNRDGG
VPTCTSLVPVEDFLKSKPKKSDSKGGPGSGLAGGEWECRNCRASGGKQISIHGGGGGYSS
GMGCGSSAGGSRPSSATCMRCEGCKKTGNLYDISEDNNHPLEQMGGGKGGGGVGCMAAGP
QAQSQAQQRRKSGGFGKQLRRQHSYDTFVDLQKEESGGMGSLMGGLGGGMGGPGMGGMLP
PPRSVSLKEKERYMEENSPFAHIFERHGGSERERDRDPLFYGGESQKGSGSPFGLFRGGE
GLHRRSIGERDMRDRSLMEGGGGAAFSLSKSLYPDRVNQNPFIPTFGDDQCLMHGAKQYY
LTKQQQQQQQVAQNSRGDFRSQLSATSYLPASATAGVMSNVPPRFPKELSLGGMNHHGSM
LAVGPPRPFNGSNGHVYEKLSSIESDV

NT seq 5124 nt +upstreamnt +downstreamnt
atgagactttggctggcaaaacacgaggtatttctctcccactcctacattatgcctctt
cgtggacgctgcagctcctcccttcctcaccaacatgctggggctcacttctccccccga
atggttgctcaggtgcaacatggggctcggacccttcatccacctccacctccatcggtt
caccgcaccacaggcacgtctttatgcctgcctctcctttttctgctgctctgtcttctc
cacctacccccagcctgtcactcacggagagaaaagggtggaggaggcggtggcggccat
tacatgcccatcccacagccccctccgcaccacatggccctgcctaacatcctgcggggc
ctaagcatcgctgttgtactggtggggaactccagcgaggtggcattggcaggggccaga
gagaaggaggactttctccacatagctccgaacgtggaggtgctgaccatgaatgaaacg
gaccccaaaagcattataaagagcatctgtgacctgatgacagagcactggctgcagggt
gtcgtctttggggacgacacagaccaggaggccatcgctcagatcctggacttcatttca
gcccaaacccacattcccatccttggagtacgtggaggctcttcaatgatcatggccgcc
aaggacgacaactccatgttctttcagtttggcccgtccatcgagcagcaggcttctgtc
atcctgaatatcatggaggagtacgactggtacatcttctccatcgtcacaacgtactac
cccggttaccaggacttcgtcaccaagatccgaaacaccattgagaacagcttcgtcggc
tgggagttggaggaagttctcctgcttgacatgtccgtggacgacggtgattcaaagatc
cagaaccagctaaagaaactccagagtcccgtgattcttctctactgcacaaaagaggag
gccaacaccatcttcgaggtggcccactccgtagggatcaccggctacggttacacgtgg
atcgtcccttcgctggttgctggagacactgtcgtagtgcctgcagagtttcccacaggt
ctgctctccgtatcctacgacgagtgggactacggtctggaagcccgtgttcgggacggt
gtggcgatcatcaccatggcgacgtccaccatgatgatggaccgtggacctcacaccctg
ctgaaatctgaatgccatggagcgccggaaaagaagaccccaatctcaggcaaccccaat
gaagtcctcaggtacctaatgaatgtgacatttgaggggcgcaatctgtcgttcagcgaa
gatgggtaccagatgcaccccaagcttgtcattattttgctcaacaaagagagacagtgg
gaccgggtgggtaaatgggagaacggctccttgtccatgaagtaccatgtgtggcctcgc
tacgagctgtatggtggggcggcaaccagggaagacgaccacctgtccatcgtgacgctg
gaagaggctccgttcgtcatcgtggaggacgtggacccgctgagtgggacctgcatgagg
aataccgtcccctgcagaaaacagatcaaaacgctcaatcagaccaaggagacggggatc
tacatcaagcgttgctgtaagggcttctgcatcgacatcctgaagaagatcgccaagtcg
gtcaagtttacgtacgacctgtacctggtcacgaacgggaagcatggcaaaaagatcaac
gggacctggaatggcatggtgggagaggttgtgttaaaaaatgcccacatggctgtcgga
tccctaaccatcaacgaggagaggtcagaggtcatcgatttttctgttcccttcatcgaa
accggaattagcgtcatggtttcccgcagtaacggcaccgtttcaccttccgcatttcta
gagccctttagtgcagatgtgtgggtgatgatgttcgtgatgctgctgctggtgtcagca
gtggctgtgttcgtgttcgagtacatcagccctgtgggctacaaccgctgtctggctgat
ggcagagagcctcacggcccgtctttcaccatcggtaaggccatctggctgctttggggt
ctcgtcttcaacaactctgtgccagtccagaaccccaaaggcaccaccagtaaaatcatg
gtgtcagtgtgggccttcttcgctgtcattttcctggcctcgtacactgccaacctggct
gctttcatgatccaagaggaatatgtggatcaagtcacgggtctctcggacaagaagttc
cagagtcccaataaattctctcctccgttccggtttggcacggtcccgaacgggagcacg
gagagaaacatcaggaacaactatccagagatgcacacctacatgaccgcgttccatcag
aggaacgtcaacgaagctctgcagagtctgaaggccggcaaactggatgctttcatttac
gacgccgccgtcctgaactacatggctggcagggacgagggctgcaagctggtgaccata
ggcagcggctacatctttgccaccacgggatacggcatcgccatccagaaggagtctggg
tggaagagacacgtggacctggccatcctgcagcttttcggcgacggtgagatggaggag
ctggagtccctgtggctgacggggatctgccaccacgagaagaacgaggtgatgtccagc
cagctggacgtggacaacatggccggggtcttctacatgctgggcgccgccatggctctg
tccctcatcaccttcatctgcgagcactggttctactggcagctgcgcttctgcttcatg
ggcgtctgctccggccagcccggcttcgtcttcagcgtcagcaggggaatatacagctgc
atacatggggtccaaatcgaagagaagagcagctctgcattgaactccccgtcagccacc
atgaacaacacccattcaaacatcatgcgcctgctacgcactgccaagaatatggcctcc
ctgtcaggggtgaatggctcgccacacagtgccctggacttcatccgtcgagactcttct
gtttatgacatctctgagcatcgccgcagcttggctggccattccgactgcaaacctcct
tacatgcctgaagacaacatgtttagtgactacatcagtgaagtggagaggacgtttggc
aaccttcatctcaaggacagtaatttgtaccaggatcactatctacaccaccatggttca
accccagggctcactggtcctcctcccaacagaccccacagtttgggcagtgctagttct
ctggagggtggcatgtttgactgtgacagcctgggtgggggagtggctcccatcttcacc
acccaaccttgctcagctctgacccacaggaacatgagcaagtttgacctgttgtctgga
cagactcctccctcaggccagagctttaagggaggactgcctgacgtctacgggaagttc
tcctttaaaggtggtgcctcaagctccacttacattccgggacctagctactgtgggggg
agaggagacgatgatggaaatatacgttcagatgtttcagacatttccacacacactgta
acgtacggaaacttggagggtaatgccaagaagcgcaaacagtaccgagacagcttaaaa
aagaggccggcctctgcaaagtccagacgggaactggatgaaattgagctgggttacagg
aggaaaccctaccacatcagccaccaccactaccacagccaacgctctgtctccccgcca
ctattgccctctgaacgtaagcgagggggtggaggaggaaacaacaatgggaactcttac
ctcttcagggaaaaggagagtgttcgggacttttatctcgaccagtttcgtcccaaagag
ggagtccctcagtgggagcatgtggacttgacggagggccctggaaacagagatggagga
gtgccaacatgcacctccttggtgccagttgaagactttctgaaaagcaaacccaaaaag
tctgactcaaagggtggaccagggtctggattggcaggcggagaatgggagtgcaggaac
tgtcgagctagtgggggcaagcagatatccattcatggaggaggtggtgggtattcaagt
ggtatgggctgtgggtcctcagctggtggcagccgccctagctctgcaacctgcatgcgt
tgtgagggttgtaaaaagacaggaaacctttacgatatcagtgaggacaataaccacccc
ttggaacaaatggggggagggaaaggtgggggaggagtgggatgtatggccgcaggccct
caggctcaatctcaggcccagcagaggagaaaaagtggaggatttgggaagcagctaagg
cgtcaacattcgtacgacacatttgttgaccttcagaaagaggaatcaggtggaatggga
agtctgatgggaggcttagggggaggcatgggaggacctgggatgggaggaatgctgccc
ccaccaaggagtgttagtttgaaggagaaagaacgctacatggaagaaaacagccccttt
gcacacatatttgaacgccatgggggctcagaaagggaaagggacagagacccattgttt
tatgggggtgagagccaaaaaggctctggttccccattcggactattcagaggtggtgag
ggcctccaccgccgctccattggagagagagacatgagagacagatctttgatggaaggt
ggaggtggggcagcattctctttatccaaatctctttaccctgaccgggtaaaccaaaac
ccctttatacccaccttcggcgatgaccagtgtctgatgcatggagccaaacaatattac
ctgacaaagcaacagcagcagcaacaacaagttgcccagaacagcagaggtgacttcagg
agtcaattgagtgcaacgtcatatctgccagcatctgccacagctggggtgatgtccaat
gtgcccccccggttcccaaaagagctcagccttggtgggatgaaccatcacgggtctatg
ttggcagtcggacccccacgtcccttcaatggaagcaatggccatgtgtacgagaaactc
tctagcattgagtctgacgtgtaa

All links

Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (5)   
   Pfam (5)   
All databases (21)   

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