KEGG   Xanthomonas campestris pv. raphani: XCR_0344
Entry
XCR_0344          CDS       T01872                                 
Symbol
tmk
Name
(GenBank) thymidylate kinase
  KO
K00943  dTMP kinase [EC:2.7.4.9]
Organism
xcp  Xanthomonas campestris pv. raphani
Pathway
xcp00240  Pyrimidine metabolism
xcp01100  Metabolic pathways
xcp01232  Nucleotide metabolism
Module
xcp_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:xcp00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00240 Pyrimidine metabolism
    XCR_0344 (tmk)
Enzymes [BR:xcp01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.4  Phosphotransferases with a phosphate group as acceptor
    2.7.4.9  dTMP kinase
     XCR_0344 (tmk)
SSDB
Motif
Pfam: Thymidylate_kin AAA_28 AAA_33 AAA_16 AAA_22 AAA_18 CbiA ABC_tran AAA_30 AAA_17 dNK LytR_C MobB NACHT KTI12 SRP54 nSTAND3 MeaB APS_kinase AAA_5 TsaE DUF3584 PPK2 AAA
Other DBs
NCBI-ProteinID: AEL05272
UniProt: G0CKC6
Position
complement(385622..386305)
AA seq 227 aa
MTIELTPGGLLIAIEGIDGAGKTTLARSLATLLEQAGARVVLSKEPTNGPWGTQLRQSAA
TGRLSAQDEVDLLLRDRREHVEALIAPALARGEIVILDRYFPSMVAYQGAAGLPLDALLA
ANDFAPRPDLLLLLDLPPPTGLARIRARGDAPNHFETQDNLERCRAIFAALQLPGKHVID
ASADADSVLRQAHAVVVAALADRLRVGATHTDAEKAALELLSAGRPA
NT seq 684 nt   +upstreamnt  +downstreamnt
atgactatcgaactcacgccaggcggcttgttgatcgcgatcgaagggatcgacggagcc
ggcaagaccaccctcgccaggagcctggccacgctgttggagcaggccggcgcgcgcgtc
gtgctgagcaaggaaccgaccaacggcccctggggcacacagctgcggcagtcggccgcc
accgggcggctgagtgcccaggacgaggtcgacctgctgctccgcgaccgccgcgagcat
gtggaagccttgatcgccccggcgctggcgcgcggagagatcgtgatcctggaccgttat
ttcccgtccatggttgcctaccagggcgccgccggcctgccgctggatgcgctgctggcc
gccaacgatttcgcgccgcgcccggacctgctgttgctgctcgacctgccgccgcccacc
ggcctggcgcgcatccgcgcacgcggcgatgcccccaatcatttcgaaacccaggacaac
ctggaacgctgccgcgcgatctttgcggcgctgcagctgccgggcaagcacgtcatcgac
gccagcgccgatgcggacagcgtgctccgccaagcccacgccgtcgtcgttgcagcactg
gccgaccgcctgcgcgtcggtgccacccacaccgacgccgaaaaggccgcgctggaactg
ctatcggccggtcgcccggcctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (4)   
   KEGG PATHWAY (3)   
   KEGG MODULE (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (24)   
   Pfam (24)   
All databases (44)   

Download RDF
DBGET integrated database retrieval system