KEGG   Xanthomonas campestris pv. raphani: XCR_2294Help
Entry
XCR_2294          CDS       T01872                                 

Gene name
rfbC
Definition
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
  KO
K01790  dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
Organism
xcp  Xanthomonas campestris pv. raphani
Pathway
xcp00521  Streptomycin biosynthesis
xcp00523  Polyketide sugar unit biosynthesis
xcp01130  Biosynthesis of antibiotics
Module
xcp_M00793  dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:xcp00001]
 Metabolism
  Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    XCR_2294 (rfbC)
  Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    XCR_2294 (rfbC)
Enzymes [BR:xcp01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.3  Acting on carbohydrates and derivatives
    5.1.3.13  dTDP-4-dehydrorhamnose 3,5-epimerase
     XCR_2294 (rfbC)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID: AEL07179
UniProt: G0CEA1
Position
complement(2386033..2386614)
Genome map
AA seq 193 aa AA seqDB search
MIFRPTPLSGAFIIEPEPRGDARGWFARVFCTQEMAQAGLVDQFVQVNNSFNAETGTLRG
MHYQLPPAPEVKIVRCIRGALWDAIVDLRPDSPTYLQWYGVELTADNRLALYVPRGFAHG
FITLQAQTEALYFASAMYTPAAERGLRWDDARIGIRWPCTPALVSDKDAAWPEFNDQVHG
VTQLTGLTQQERA
NT seq 582 nt NT seq  +upstreamnt  +downstreamnt
atgatcttccgccccacgccgctgtctggtgccttcatcattgagcccgaaccgcgtggc
gatgcgcgtggatggtttgcgcgggtgttctgtacccaggagatggcgcaggccgggctg
gtagaccagttcgtccaggtcaacaactccttcaacgcagagaccggcaccttgcgcggc
atgcactatcagctgccgcccgcgccggaggtcaagatcgtgcgctgcatccgcggcgcg
ctgtgggatgccatcgtcgacctgcgcccggattcgcccacctacctgcagtggtacggg
gtcgaactcactgccgacaaccgcctggcactgtatgtgccgcgcgggtttgcgcatggc
ttcatcacgctgcaggcgcagaccgaagcactgtatttcgccagtgcgatgtataccccg
gctgccgagcgcggcttgcgctgggacgatgcgcgcatcggcatccgctggccgtgcacg
cccgcattggtgtccgacaaggacgccgcctggccggagttcaatgaccaggtgcatggc
gtgacccaactgaccgggctgactcaacaggagcgcgcatga

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