KEGG   Xanthomonas campestris pv. raphani: XCR_2437
Entry
XCR_2437          CDS       T01872                                 
Name
(GenBank) oligoribonuclease
  KO
K13288  oligoribonuclease [EC:3.1.-.-]
Organism
xcp  Xanthomonas campestris pv. raphani
Brite
KEGG Orthology (KO) [BR:xcp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xcp03019]
    XCR_2437
   03009 Ribosome biogenesis [BR:xcp03009]
    XCR_2437
Messenger RNA biogenesis [BR:xcp03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     XCR_2437
Ribosome biogenesis [BR:xcp03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    XCR_2437
SSDB
Motif
Pfam: RNase_T DUF2252
Other DBs
NCBI-ProteinID: AEL07312
UniProt: G0CFJ4
Position
complement(2544259..2544843)
AA seq 194 aa
MADNVAGNDRLIWIDLEMTGLDTDRDSIIEIATIVTDAQLNVLAEGPELAIAHSLETLEA
MDEWNRNQHRRSGLWQRVLDSQVTHAQAEAQTVAFLGEWIRAGASPMCGNSICQDRRFLH
RQMSRLERYFHYRNLDVSTIKELARRWAPAVASGFAKSSAHTALSDVRDSIDELRHYRQF
MGTLGGDNGGGVQN
NT seq 585 nt   +upstreamnt  +downstreamnt
atggcagacaacgttgcgggcaacgaccgactgatctggatcgatctggaaatgaccggc
ctggataccgatcgcgattcgatcatcgagatcgccaccatcgtgaccgatgcgcagttg
aacgtgctcgccgaggggccggaactggccattgcccattcgctggaaaccctggaagcg
atggacgaatggaaccgcaaccagcaccgccgctccggcctgtggcaacgcgtgctcgac
agccaggtcacccacgcgcaagccgaggcgcagacagtggccttcctgggcgaatggatc
cgcgccggcgcctcgccgatgtgcggcaattcgatctgtcaggaccgccgtttcctgcac
cgccagatgtcgcgcctggagcgctatttccattaccgcaacctggacgtgtccaccatc
aaggaactggcgcggcgctgggcaccggcagttgcctccggctttgccaagagttcggcg
catacggcgctgagcgacgtgcgcgactccatcgacgagctgcggcactaccggcaattc
atgggcacgctgggtggcgataacggcggcggtgtgcagaactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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