KEGG   Xanthomonas campestris pv. raphani: XCR_4594
Entry
XCR_4594          CDS       T01872                                 
Symbol
trmE
Name
(GenBank) tRNA modification GTPase TrmE
  KO
K03650  tRNA modification GTPase [EC:3.6.-.-]
Organism
xcp  Xanthomonas campestris pv. raphani
Brite
KEGG Orthology (KO) [BR:xcp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:xcp03016]
    XCR_4594 (trmE)
Transfer RNA biogenesis [BR:xcp03016]
 Eukaryotic type
  tRNA modification factors
   Other tRNA modification factors
    XCR_4594 (trmE)
 Prokaryotic type
   Methyltransferases
    XCR_4594 (trmE)
SSDB
Motif
Pfam: MnmE_helical TrmE_N MMR_HSR1 FeoB_N Dynamin_N RsgA_GTPase MCM AAA_28 AAA_16 ABC_tran T6SS_Tsi2-like GTP_EFTU AIG1 AAA_22 Ras AAA_29 AAA_21
Other DBs
NCBI-ProteinID: AEL09445
UniProt: G0CBV1
Position
complement(4934652..4935992)
AA seq 446 aa
MNASPSTIVAIATAAGTGGIGIVRLSGPQSVQIAAALGIAGLQSRHARYARFRDAQGEVI
DDGIAVWFPAPHSFTGEEVVELQGHGSPVLLRQLVARCIALGARQARAGEFSERAFLNGK
LDLAQAEAIADLIAAGDLRAARAARRSLDGVFSRRVDAVSESLTRLRIHVEAAIDFADEP
LDTLGGAQVREELTRTRALLAQLLRDAERGRKLRDGLHAVLIGPPNAGKSSLLNALAGSD
RAIVTDVAGTTRDTLHEAIQLDGFELTLVDTAGLREGGDAIEREGMRRARAELQRADLAL
IVVDARDPQAARDALGDAIDAVPRRLWIHNKCDLLAVAGPMDADAIAVSAVTGQGLEHLH
TRLRELALGDGIESVDGEFSARTRHVDALHRAEQHADAADLELRYEQLELAAEELRLAHE
ALGEITGKLSADDLLGKIFSSFCIGK
NT seq 1341 nt   +upstreamnt  +downstreamnt
atgaatgcttcgccttccaccatcgttgccatcgccactgctgccggaactggcggtatc
ggtatcgtgcggctgtccggcccgcagtctgtacagatcgccgccgcgctgggcatcgcc
ggactgcaatcgcggcatgcgcgttacgcgcgctttcgtgatgcgcagggcgaggtgatc
gatgacggcatcgcggtgtggttccccgcgccgcacagcttcaccggcgaagaggtggtg
gagctgcagggccacggcagcccggtgctgctacggcaattggtggcccgctgcatcgcg
ctgggtgcacgccaggcgcgtgcgggtgagttcagtgagcgggccttcctcaacggcaaa
ctcgacctggcacaggccgaagcgattgccgacctgatcgccgccggcgatctgcgcgca
gcgcgtgcggcgcgcagatcgctcgacggtgtgttctcgcggcgcgtggatgcggtgagt
gagagcctcacgcggttgcgcatccatgtggaagcggcgatcgactttgccgacgagccc
ctcgacacgctgggcggcgcgcaggtgcgcgaggagctcacccgcacgcgcgcattgctt
gcgcagctgttgcgcgatgccgaacgtggacgcaagttgcgcgatggtttgcacgcagtg
ctcatcggtccgcccaacgccggcaagagttccttgctcaatgccttggccggcagtgat
cgggcgatcgtgaccgatgttgccggtaccacgcgcgataccttgcatgaagcgatccag
ctcgatggattcgaactgaccctggtcgataccgcaggcctgcgcgagggcggcgatgca
atcgagcgcgaaggcatgcgccgcgcgcgcgccgaactgcagcgtgccgacctggcgctg
atcgtggtggatgcacgtgacccgcaggccgcgcgcgatgccctcggcgatgccattgat
gcggtaccgcgccggttgtggatccacaacaaatgcgacctgctggcggtggctgggcca
atggacgccgatgcgatcgcggtgtctgcggtgaccgggcaggggctggagcacctgcac
acccgcctgcgcgaactggcgctgggcgatggcatagaaagcgtggatggcgaattttca
gcgcgcacgcggcatgtcgatgcattgcaccgcgccgaacaacatgccgacgccgcagat
ctggagctgcgctacgagcagctcgaactggccgccgaagaactgcgcctggcgcatgaa
gccctcggcgaaatcaccggcaagctcagcgcggacgatttactcggcaagatcttttcg
agtttttgtatcgggaagtaa

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Ontology (2)   
   KEGG BRITE (2)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (17)   
   Pfam (17)   
All databases (33)   

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