KEGG   Xanthomonas citri pv. citri MN11: J163_01240
Entry
J163_01240        CDS       T03780                                 
Name
(GenBank) DNA polymerase III, subunit gamma and tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
xcr  Xanthomonas citri pv. citri MN11
Pathway
xcr03030  DNA replication
xcr03430  Mismatch repair
xcr03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:xcr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    J163_01240
   03430 Mismatch repair
    J163_01240
   03440 Homologous recombination
    J163_01240
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:xcr03032]
    J163_01240
   03400 DNA repair and recombination proteins [BR:xcr03400]
    J163_01240
Enzymes [BR:xcr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     J163_01240
DNA replication proteins [BR:xcr03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     J163_01240
DNA repair and recombination proteins [BR:xcr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     J163_01240
SSDB
Motif
Pfam: DNA_pol3_delta2 DNA_pol3_gamma3 DNA_pol3_tau_5 AAA RuvB_N AAA_16 AAA_22 AAA_5 AAA_14 ResIII PIF1 AAA_7 AAA_18 AAA_30 AAA_19 Mg_chelatase nSTAND3 TsaE AAA_24 AAA_2 SKI
Other DBs
NCBI-ProteinID: AJY98968
UniProt: A0A0U5FAI8
Position
1259814..1261883
AA seq 689 aa
MSYLVLARKWRPKRFAELVGQEHVVRALSNALDSGRVHHAFLFTGTRGVGKTTIARIFAK
SLNCETGTSADPCGTCPACLDIDAGRYIDLLEIDAASNTGVDDVREVIENAQYMPSRGKF
KVYLIDEVHMLSKAAFNALLKTLEEPPEHVKFLLATTDPQKLPVTVLSRCLQFNLKRLDE
DQIQGQMTRILAAEPIESDPSAIVQLSKAADGSLRDGLSLLDQAIAYAGGALREDVVRTM
LGTVDRTQVGAMLHALTDGDGARLLQVVAALAEFSPDWSGVLEALAEALHRVQVQQLVPS
VAFVGDGIDPTPFAAQLRPEVVQLWYQMALNGRRDLYLAPSPRAGFEMAVLRMLAFRPAA
AVPAGGSDDGRGATAGGGARSAAAGGQLAAPVAAAPVTSAPAVVAAPTAVTDTMPVAAAE
ASLPASGTRATPAPLVVLSPQESSPASRASAANARNDDTPPWAVDDAPVRARATPTPDTM
GVLAPEAAMAPPSAPVELAQPDGIASDAAVEAPASVVVPSPAALVEPSSPEEPAVVASAA
TAGAASDAATDAAALLDDGRIADAEQWLELVTRSGLNGPSRQLAANAAFIGHRDGVLRLA
LAPGFEYLNSERSIANLAQALAPVLGNAPRIVVETGSADVETLHERASRQKGERQSAAET
AFMNDPTVQLLVQQQGARIVPDSIRPYDE
NT seq 2070 nt   +upstreamnt  +downstreamnt
atgtcttatcttgttctcgcccgcaagtggcgcccgaagcgttttgccgaactcgtaggc
caggaacacgtggtccgcgcgctcagtaacgcgctcgacagtgggcgcgtgcatcacgcg
ttcctgttcaccggcacccgtggcgtgggcaagaccaccatcgcgcgcattttcgccaaa
tcgctcaattgcgagaccggcaccagtgccgatccgtgcgggacgtgcccggcctgcctg
gacatcgatgccggtcgctacatcgacctgctggagatcgacgccgcgtccaacaccggc
gtggacgacgtgcgcgaggtgatcgagaacgcccagtacatgccctcgcgcggaaagttc
aaggtctacctgatcgacgaagtgcacatgctctccaaggcggcgttcaatgcgctgctg
aagacgctggaagagccgccggaacacgtgaagttcctgctggccaccaccgatccgcag
aaacttccggtgacggtgctgtcgcgctgcctgcagttcaacctcaagcggttggacgaa
gaccagattcagggccagatgacacgcatcctggccgccgaaccgatcgaatcggatccg
tcggcgatcgtgcagctgtccaaggcggccgacggttcgctgcgcgatggtctgtcgctg
ctggaccaggcgatcgcctatgccggcggcgcgctgcgcgaggacgtggtgcgcaccatg
ctgggcacggtcgatcgcacccaggtcggcgccatgctgcacgcgttgaccgacggcgat
ggcgcgcgcctgctgcaggtagtggcggcgctggccgaattttcgcccgactggagcggc
gtgctggaggccctggccgaggcgttgcatcgagtgcaggtgcagcagctggtgccctcg
gtggcctttgtcggcgacggcatcgacccaaccccgtttgcagcgcagctgcggccggaa
gtggtgcagttgtggtaccagatggcgctgaacgggcgccgcgatctgtatctggcgccc
agcccgcgcgccggtttcgaaatggcggtgctgcgcatgctcgcctttcgccccgcagcg
gcggtaccggctggcggctcggatgacgggcgcggtgccactgctggcggtggcgcgcgt
tcggccgctgccggcggtcagcttgctgctccagtagcggcggcaccggtgacgtccgcg
cccgccgtagtggccgcgccgactgcggtgacggatacgatgcctgttgcggctgcggag
gcgtccttgccggcatcagggacccgggcaactccggctccccttgtcgtgctttctccc
caagagtcttctccggccagtcgcgcgtctgcagccaatgcgcgcaatgacgacacgccg
ccctgggcagtggacgatgcgccggtgcgtgcgcgggccacgcctacacccgacacgatg
ggcgtgcttgcgcctgaagcggcaatggctccgccgtctgcacccgtcgagctcgcgcaa
cccgatgggattgcgtctgacgctgcggtggaagctccggcttcggttgtagtgccttca
ccggccgcgcttgtcgagccctcgtcgcctgaagagccagcggtggtcgcgtcagcggca
acggcaggggctgcatcagacgcggcaaccgacgcggcggccctgctcgatgacggccgc
atcgccgatgccgagcaatggctggagctggtgacgcgcagtggcttgaatggcccgtcg
cgccagctggccgccaacgccgcgtttatcggccatcgcgatggcgtgctgcggctcgca
ctcgcgccgggcttcgaatatctcaactccgagcgctccatcgccaatctcgcgcaggcg
ctggcaccggtgttgggaaacgcgccgcgcatcgtcgtcgaaaccggcagcgccgacgtc
gaaaccttgcatgagcgtgccagccgccagaaaggcgagcgccagagcgcggccgaaaca
gccttcatgaacgacccgacggtgcagctgctggttcagcagcaaggcgcgcggatcgtg
cccgattccatccgcccttacgacgagtaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (21)   
   Pfam (21)   
All databases (34)   

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