KEGG T03584: J151

Xanthomonas citri subsp. citri A306: J151_03692

Entry

J151_03692        CDS       T03584

Name

(GenBank) hypothetical protein

K18195

rhamnogalacturonan endolyase [EC:4.2.2.23]

Organism

xct Xanthomonas citri subsp. citri A306

Brite

KEGG Orthology (KO) [BR:xct00001]
09190 Not Included in Pathway or Brite
  09191 Unclassified: metabolism
   99980 Enzymes with EC numbers
    J151_03692
Enzymes [BR:xct01000]
4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.23  rhamnogalacturonan endolyase
     J151_03692

SSDB

Motif

Pfam:

RhgB_N CBM-like fn3_3 CarboxypepD_reg PapC_N

Other DBs

NCBI-ProteinID:

AJD70098

Position

4143642..4145327

AA seq 561 aa
MRTVSVFSTRLASRARIATMPCFRTLTRVPRNRPHTFACALLLYAGVSAPALADFGISRS
GDRVIVDSGAELVFAVDARNGDIVSMRYRDNELQTTESKGSHIASGLGSASVDARIVGGT
IVVSAKAGDLVQYYIARKGRNAIYMATDAPSLMPVGELRFVARLNVSTLPNAQQEPDSNV
GKAIEGNDVFLLPDGRTSSKFYSARRMMDDQVHGVSGSGVAVFMLTGNRERSAGGPFFKD
IATQKTSVTHELYHYMYSDHTQTEAFRGGLHGVYGLLFTDGSSPSSAQLDTAFVDATLGL
SGYLPASGRGTVSGHVGGVLPGQPAVIGLRNAQAQYWATADGSGDYRVTGVRPGSYRMTL
YQNELDVAQRNIEVSAGATAHAALQAVVLPGTVKWQIGIPDGTPAGFRYADLLPRAHPSD
ARMHWSAVTYTVGSSSLSSFPAVQWRGINTPSRIDFTLPANEVRGYRLRIFVPLAQGSAR
PQISVNARWNGSVPAAPTQPKTRGITRGTARGNNTLYEVDIPASALHAGNNRIEIGIASG
SPDNGYLSPAIVFDSIQLVAL

NT seq 1686 nt +upstreamnt +downstreamnt
gtgcgcacagtctccgtcttcagcactcgcctggcatcgcgcgcacgcatcgcgaccatg
ccttgcttccggacactcacccgcgtgcctcgcaatcgtccacataccttcgcctgcgcg
ctgctgctctatgccggcgtcagcgcacctgcgctggccgacttcgggatcagccgcagc
ggcgaccgcgtgatcgtcgacagcggcgccgagctggtgtttgcggtcgatgcccggaat
ggcgacatcgtctcgatgcgctatcgcgacaacgaactgcagaccaccgaatcgaagggc
tcgcacatcgcttcggggctgggcagtgccagtgtggatgcacgcatcgttggcgggacg
atcgtggtgtcggccaaggccggcgacttggtccagtactacatcgcgcgcaagggccgc
aacgcgatctacatggccaccgatgcgccaagcttgatgccggtgggcgaattgcgcttc
gtcgcccgcttgaacgtgtccacgttgccgaatgcgcagcaggagcccgattccaatgtc
ggcaaagcgatcgaaggcaacgatgtctttctattgccggatgggcgcaccagttccaag
ttctattccgcccgtcgaatgatggacgaccaggtgcatggcgtcagcggctctggcgtt
gccgtgttcatgctgacgggcaaccgcgagcgcagcgcgggcggcccgttcttcaaggac
atcgcgacacagaaaaccagcgtgacgcatgagctctatcactacatgtattccgatcac
acccagaccgaagcgtttcgcggcggcctgcacggtgtgtacgggctgctgttcaccgat
gggagctcgccgtcgagtgcgcaactggacaccgccttcgtcgatgccacgctgggcctg
agcggttatttgccggcaagcgggcgcggcaccgtgagcgggcacgtcggcggcgtgttg
ccgggccagccggccgtcatcggtctgcgcaatgcgcaggcgcagtactgggccactgcc
gacggcagcggcgactaccgggtgacgggtgttcgcccgggcagctatcgcatgacgctc
taccagaacgaactagacgtcgcacaacgcaacatcgaggtttccgccggcgccactgcg
cacgccgcactgcaggcagtcgttttgccgggcacggtgaagtggcagatcggcattccc
gatggcacgccggcagggttcagatatgcggacctgttaccgcgggcgcacccttccgat
gcgcgcatgcactggtctgcggtgacctacaccgtgggatcgagcagcctgagcagcttt
ccggcggtgcagtggcgcggcatcaacaccccgagccggatcgacttcaccctgcccgcc
aacgaggtgcgcggctatcgcctgcgtatcttcgtgccgttggcacagggcagcgcacgt
ccgcagatcagcgtgaatgcacgctggaacggctcggtgcctgccgcgcccacgcagcca
aagacacgcggcatcacgcgcggcactgcgcgtggcaacaacaccctgtacgaagtggac
atccccgcctctgccttgcatgccggcaacaaccgcatcgagatcggcattgcctccggc
tccccggacaacggttacctcagcccggcaatcgtgttcgacagcatccagctggtagcg
ttatag

All links

Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (12)   

Download RDF

DBGET integrated database retrieval system