KEGG   Xanthomonas citri pv. citri UI7: J159_00115
Entry
J159_00115        CDS       T03733                                 
Name
(GenBank) DNA gyrase subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
xcu  Xanthomonas citri pv. citri UI7
Brite
KEGG Orthology (KO) [BR:xcu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:xcu03032]
    J159_00115
   03400 DNA repair and recombination proteins [BR:xcu03400]
    J159_00115
Enzymes [BR:xcu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     J159_00115
DNA replication proteins [BR:xcu03032]
 Prokaryotic type
  DNA Topoisomerases
   J159_00115
DNA repair and recombination proteins [BR:xcu03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      J159_00115
SSDB
Motif
Pfam: DNA_gyraseB GyrB_insert DNA_gyraseB_C Toprim HATPase_c GyrB_hook Toprim_4 SMC_hinge
Other DBs
NCBI-ProteinID: AJY80124
UniProt: A0A0U5FAT4
Position
5020..7464
AA seq 814 aa
MTDEQNTPPTPNGTYDSSKITVLRGLEAVRKRPGMYIGDVHDGTGLHHMVFEVVDNSVDE
ALAGHADDIVVKILADGSVAVSDNGRGVPVDIHKEEGVSAAEVILTVLHAGGKFDDNSYK
VSGGLHGVGVSVVNALSEHLWLDIWRDGFHYQQEYALGEPQYPLKQLEASTKRGTTLRFK
PSVAIFSDVEFHYDILARRLRELSFLNSGVKITLIDERGEGRRDDFHYEGGIRSFVEHLA
QLKSPLHPNVISVTGEHNGIMVDVALQWTDAYQETMYCFTNNIPQKDGGTHLAGFRAALT
RVLSTYIEQNGIAKQAKVALTGDDMREGMIAVLSVKVPDPSFSSQTKEKLVSSDVRPAVE
NAFGARLQEFLQENPNEAKAITGKIVDAARAREAARKARDLTRRKGALDIAGLPGKLADC
QEKDPALSELFIVEGDSAGGSAKQGRNRKNQAVLPLRGKILNVERARFDRMLASDQVGTL
ITALGTGIGRDEYNPDKLRYHRIILMTDADVDGSHIRTLLLTFFYRQMPELIERGYIYIG
LPPLYKLKQGKSELYLKDDAALNAYLASNAVEGAALIPATDEPPITGEALEKLLMLFTSA
NEAIARNAHRYDPALLTALIDLPPLDVEKLQAEGDQHPTLDALQAVLNRGTLGTARYQLR
FDPGSDNAPATLVAIRRHMGEEFTQVLPMGAFESGELRPLREVSLALHDLVREGAQIVRG
NKSHPITSFAQAHAWLLDEAKKGRQVQRFKGLGEMNAEQLWETTVNPDTRRLLQVRIEDA
VAADQIFSTLMGDVVEPRRDFIEDNALKVSNLDI
NT seq 2445 nt   +upstreamnt  +downstreamnt
atgaccgacgaacaaaacaccccgccaacacccaacggcacctacgactccagcaagatc
accgtgctgcgtggcctggaagccgtccgcaagcgtcccggcatgtatatcggcgacgtc
catgacggcaccggcctgcatcacatggtgttcgaggtggtcgacaactcggtcgacgaa
gcccttgccgggcatgccgacgacatcgtggtaaaaatcctggccgatggctcggtggcg
gtctccgacaacgggcgcggcgtgccggtcgacatccacaaggaagaaggcgtgtcggcg
gccgaggtgatcctcaccgtgctccacgccggcggcaagttcgacgacaacagctacaag
gtctccggcggcctgcacggcgttggcgtctcggtggtcaacgcgttgtcagagcacctg
tggctggatatctggcgcgacggcttccactaccagcaggaatacgcgctgggcgagccg
cagtacccgctcaagcagctggaagcctcgaccaagcgcggtaccacgctgcgcttcaag
ccgtccgtggccatcttcagcgacgtcgagttccattacgacatcctggcgcggcgcctg
cgcgagctgtccttcctcaattctggcgtcaagatcaccttgatcgacgagcgcggcgaa
ggccgtcgcgacgatttccattacgaaggcggcatccgcagcttcgtggagcatctggcg
cagctgaagtcgccgctgcacccgaatgtgatctcggtgaccggcgagcacaacggcatc
atggtggacgtggccctgcaatggaccgacgcctaccaggaaaccatgtactgcttcacc
aacaacatcccgcagaaggacggcggcacccacctggccggcttccgtgcggcgctgacg
cgcgtgctcagcacctacatcgaacagaacggcatcgccaagcaggccaaggtcgcgctg
accggcgacgacatgcgcgaaggcatgatcgcggtgctttcggtcaaggtgcccgacccc
agcttctcttcgcagaccaaggaaaagctggtcagttcggatgtgcgcccggcggtggaa
aacgccttcggtgcgcgcctgcaggagttcctgcaggagaacccgaacgaagccaaggcc
atcaccggcaagatcgtcgatgccgcgcgtgcgcgcgaagcggcgcgcaaggcgcgcgac
ctcacccgccgcaagggtgcgctggacatcgcaggcctgcccggcaagctggccgactgc
caggaaaaggatccggcactgtcggaactgttcatcgtcgagggtgactcggcaggtggc
tcggccaagcagggccgcaaccgcaagaaccaggcggtgctgccgctgcgcggcaagatc
ctcaacgtggaacgcgcccgcttcgaccgcatgctggcctccgaccaggtcggcacgctg
atcaccgcgctcggtaccggcatcggccgcgacgagtacaacccggacaagctgcgctac
caccgcatcatcctgatgaccgacgccgacgtcgacggctcgcacatccgcaccctgctg
ctgaccttcttctaccggcagatgccggagttgatcgagcgcggctacatctacatcggc
ctgccgccgctgtacaagctcaagcagggcaagagcgagctgtatctgaaggacgacgcg
gcgctcaacgcctacctggccagcaatgcggtcgaaggtgcggcgctgattccggccacc
gacgagccaccgatcaccggcgaagcgctggagaaattgttgatgctgttcaccagcgcc
aacgaagcgatcgcgcgcaacgcccaccgctacgacccggccctgctcaccgcgctgatc
gacctgccgccactggatgtggaaaaactgcaggccgaaggcgaccagcatccgactttg
gatgcgctgcaggccgtgctcaatcgcggcaccctgggcaccgcgcgctatcagttgcgc
ttcgacccgggcagcgacaacgcgcctgccacgttggtggccatccgccgccacatgggc
gaagagttcacccaggtgctgccgatgggggccttcgaaagcggcgagctgcgcccgctg
cgtgaggtgtcgctggccctgcacgacctggtgcgcgaaggcgcccagatcgtccgcggc
aacaagagccacccgatcaccagcttcgcgcaggcccatgcctggttgctggacgaggcc
aagaagggccgccaggtgcagcgcttcaagggcctgggcgaaatgaatgccgagcagcta
tgggaaaccacggtcaaccccgacacgcgtcgcctgttgcaggtgcgcatcgaggacgcg
gtggccgccgaccagatcttcagcaccttgatgggcgatgtggtcgaaccacgccgcgac
ttcatcgaggacaacgcgctgaaggtgtccaacctggatatctga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (18)   

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