KEGG   Xenorhabdus doucetiae: XDD1_2953
Entry
XDD1_2953         CDS       T03784                                 
Symbol
recJ
Name
(GenBank) Single-stranded-DNA-specific exonuclease recJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
xdo  Xenorhabdus doucetiae
Pathway
xdo03410  Base excision repair
xdo03430  Mismatch repair
xdo03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:xdo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    XDD1_2953 (recJ)
   03430 Mismatch repair
    XDD1_2953 (recJ)
   03440 Homologous recombination
    XDD1_2953 (recJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xdo03400]
    XDD1_2953 (recJ)
DNA repair and recombination proteins [BR:xdo03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     XDD1_2953 (recJ)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     XDD1_2953 (recJ)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      XDD1_2953 (recJ)
SSDB
Motif
Pfam: DHHA1 DHH RecJ_OB Glyco_transf_4
Other DBs
NCBI-ProteinID: CDG18652
UniProt: A0A068QUF9
Position
complement(3146563..3148296)
AA seq 577 aa
MNREIQLRRRPVADSSHLPDNIHPLLRRLYAMRGIRQADELERGAKGLLNYQSLNGIEQA
VTLLVTALHEHWRIVIVGDFDADGATSTALSMRALRAMGYRNLDYLVPNRFEDGYGLSVQ
VVDEVVKKSADLIITVDNGISSHEGVAAAHRHGIKVIVTDHHLPAETLPAADAIINPNLV
DCAFPSKALAGVGVAFYLMSALRAELRQLAWFDQQGIPLPNLAELLDLVALGTVADVVPL
DTNNRILVYQGLNRIRAGRCCAGIRALLEVSKREATKLAASDLGFALGPRLNAAGRLDDM
SVGVALLLADDMMQARQIACELDGLNQTRREIEQGMQQEALQICDKIERTHTQLPYGLAI
YHPEWHQGVVGILASRIKERFHRPVIAFAPAGDGTLKGSGRSVNGLHMRDALERLDTLHP
GLMLKFGGHAMAAGLSIEQDKFELFQRYFSELVADWMDIAQLEGVVWSDGELALGELSLE
MAEILRDGGPWGQAFAEPVFDGKFKLLQQRLVGEKHLKVMLEPLNGGPILDGIAFNIDVS
RWPDNSIKTVELAYKLDINEFRGNRDLQLLIQHIWPY
NT seq 1734 nt   +upstreamnt  +downstreamnt
gtgaatagagaaatacaactccgccgccgaccagtggcggattctagccatcttcccgac
aatatccatccattattgcgccgtttatacgccatgcgcggtatccgtcaagctgatgag
ctggaacgtggtgcaaagggacttctcaattaccaatccctcaatgggattgagcaagcc
gttaccttactggtcactgcgttacatgaacattggcgtatcgtgattgtcggcgatttc
gatgcagatggcgcaaccagtacggcattgagtatgcgtgccttgcgtgcgatgggatat
cgcaaccttgattaccttgtgccaaaccgttttgaagatggttatggattaagcgttcag
gtggtggatgaagttgtcaaaaaaagcgcggatctgattatcaccgtggataatgggatc
tcatcccatgagggtgttgccgccgcacatcgacacggcatcaaagtgatcgtcacggat
caccatttaccggctgaaacattgccagccgcagacgccattatcaatcccaatttagtt
gactgcgcctttccttctaaagcgttggcaggggtgggcgtcgcattttacctgatgtcc
gcactcagggcagaattgcgtcaattggcatggtttgaccaacaaggcattccattgccc
aatctggcggaactgctggatttagtggcactggggacagtagcagatgtggttcccctc
gataccaacaaccgcattctggtctatcagggattaaatcgcattcgggcagggcgttgc
tgtgcgggaatacgagctttgctcgaagtctccaagcgggaagcgacaaaattggctgcc
agtgatttgggatttgccttggggccacgattaaatgccgccggccgtctggatgatatg
tctgtcggggtggcgttactattggctgatgacatgatgcaggctcgccaaatcgcgtgt
gagttggatggcctgaaccaaactcgccgggaaatcgaacagggcatgcagcaggaagcc
ttgcagatttgcgataaaatcgagcgcacccatactcagcttccttacgggctggccatt
taccatcccgaatggcatcagggagtcgtgggtattttggcttcacgcattaaagagcgt
tttcaccgcccggtcattgctttcgctccggcgggggatggaacgttgaaagggtcaggg
cgttccgtcaatggcctgcatatgcgcgatgcccttgagcgactcgataccctgcatccg
gggctgatgttgaagtttggcggtcatgcgatggcagcgggattgtcgattgagcaagac
aaatttgaactctttcagcgctatttttccgagctggtcgccgactggatggatattgcc
caacttgaaggcgttgtttggagcgatggtgaattagcattgggtgaattatcgttggaa
atggctgaaattctgcgtgatggtggcccgtggggtcaggcatttgcagagccggttttt
gacggcaaattcaagttactgcaacagcgcctagtgggtgaaaagcacctgaaagtcatg
cttgagccattaaatggcgggccgatattagatggcatcgcatttaacattgatgtcagc
cgctggccggataacagtatcaaaacagtagaattagcctataagctggatattaacgaa
tttcgcggtaatcgtgatctccagcttttgatccaacatatttggccgtattga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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