KEGG   Xylella fastidiosa Hib4: XFHB_10020
Entry
XFHB_10020        CDS       T04925                                 
Name
(GenBank) ssDNA exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
xfh  Xylella fastidiosa Hib4
Pathway
xfh03410  Base excision repair
xfh03430  Mismatch repair
xfh03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:xfh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    XFHB_10020
   03430 Mismatch repair
    XFHB_10020
   03440 Homologous recombination
    XFHB_10020
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xfh03400]
    XFHB_10020
DNA repair and recombination proteins [BR:xfh03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     XFHB_10020
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     XFHB_10020
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      XFHB_10020
SSDB
Motif
Pfam: DHHA1 DHH RecJ_OB
Other DBs
NCBI-ProteinID: ALR07792
UniProt: A0A806WWI7
Position
complement(2131458..2133299)
AA seq 613 aa
MWCAYSAGRLSVPKIIRRLSVPVAVWPDNVPPLLRRVYTARGCADPVTAQPCLAQLLSPA
TLSNIQAATVLLTQVIKANGRILVVGDFDCDGATACAVAVRGLRLLGARNVMHAVPNRMV
HGYGLSSALVEELAPLQPALLVTVDHGIACHAGVAAAKARGWQVLVTDHHLPGEILPPAD
VIVNPNLPGDLFPSKTLAGVGVIFYVLLALRARLYPVAHAEYEGQETLIHRSISQKNRPD
LTSLLDLVAVGTVADLVPLDTNNRALVAAGLRRLRRGQGCLGLRALIEVSGRDESQLTAT
DIGFALSPRLNAAGRLEDMALGIELLLTEDWTRARAIAAMLEEMNAARRVVQQGMSDDAE
QAVAQAMAQSGGVLPMAVCLFNPDWHPGVIGLVASKMKDKMYRPVVALAPAEPGGTVLRG
SARSIPGLHIRDVLVALDSGYPGMIQKFGGHAMAAGLTLDAEVLPVFERVFRAQVEMMVD
KNVLQAELYSDGELAADELDALHARALRLGGPWGQGFPEPLFDGEFEVLQWRVLKECHLK
MEVRHAGRHDALNAIYFNGWQGDPPARRLRLAYRLVCDDYRGGDAIQLIVEYAEVIECDV
SGFQAISSGVLDP
NT seq 1842 nt   +upstreamnt  +downstreamnt
gtgtggtgtgcgtactcagctggccgattgagcgtgcccaagattattcgccgtctctct
gtgccggtggccgtttggcctgacaatgtgccgccattgctgcgacgcgtgtacacggca
cgcggttgtgccgatccggtgacggcgcaaccctgtctcgctcagttgttgtcacccgcc
acgctgagcaacatccaggcagccactgtattgctgacccaggtcatcaaggccaatggg
cgtattctggttgtcggtgattttgactgcgatggtgcaactgcctgtgcggttgcggtg
cgtggtttgcgtttgcttggcgcgcgtaacgtgatgcatgcggtccccaatcgtatggtg
catggttacggtttgtcgtcggcattggttgaggagttggcaccgttgcagccagcgttg
cttgtcacggtggatcacggcattgcttgtcatgccggcgttgctgctgctaaggctcgc
ggttggcaggtgttggtgactgatcaccatttgccgggtgaaatcttgccgccagccgat
gtcattgttaatccgaatttgcctggcgatttgtttccgagtaaaacgctggcgggtgtc
ggggtgatcttttatgtactgctcgcgctgcgtgcgcgtctttatcctgttgctcatgcg
gagtacgaaggtcaagaaacgcttattcaccgttctatttctcagaaaaaccgtcctgat
ttgacgtctttactggatttagttgcggtcgggacggttgctgacttagtacccttagat
accaataatcgtgctttggttgctgcgggcttgcgccggttgcgtcgtggtcaagggtgt
ctcggactacgcgcgttgatcgaggtcagtggccgtgatgagtcgcaattgaccgctact
gatattggttttgcattgagtccgcgtctgaacgctgcgggacggctggaggatatggcg
ttgggcattgaactgttgctcactgaggattggactcgcgcgcgtgctatcgcagccatg
cttgaggagatgaatgccgcacgccgtgtggtacagcagggtatgagtgacgatgctgag
caggcagtagcgcaagcgatggcgcagtcaggcggtgtgttgccaatggcggtgtgcctg
ttcaatccggactggcatccaggggtgattggtctggtcgcgtccaagatgaaggacaaa
atgtaccgtccggtggtggctttagccccggctgagccgggaggtacagtgttgcgaggg
tcggcacggtcgatcccagggctgcatatccgcgatgtattggtggcgctcgacagtggt
tatcccgggatgattcagaaatttggaggtcatgcgatggcggccggcttgacactggat
gcggaggtgttgccggtgttcgaacgtgtatttcgtgcccaagttgagatgatggttgat
aagaatgtgttgcaggctgagttgtatagcgatggtgaattggcggccgatgagctggac
gcattacatgcgcgggcattgcggctgggtgggccatggggacaggggtttccagagcca
ttgtttgatggagagtttgaagtgctgcaatggcgtgtcctcaaggagtgtcatttgaaa
atggaggtgcgtcatgcaggacggcatgacgccctgaacgcgatttatttcaatggctgg
cagggtgatcctccagcacggcgattgcgtttggcatatcggttggtttgcgacgattac
cgcggtggtgatgcgattcagttgatcgtggaatatgcggaagtgattgaatgtgatgta
tcgggtttccaagcaatttccagtggcgtacttgatccttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

Download RDF
DBGET integrated database retrieval system