KEGG   Xylella fastidiosa M12: Xfasm12_0954
Entry
Xfasm12_0954      CDS       T00677                                 
Name
(GenBank) Exodeoxyribonuclease I
  KO
K01141  exodeoxyribonuclease I [EC:3.1.11.1]
Organism
xfm  Xylella fastidiosa M12
Pathway
xfm03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:xfm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    Xfasm12_0954
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xfm03400]
    Xfasm12_0954
Enzymes [BR:xfm01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.1  exodeoxyribonuclease I
     Xfasm12_0954
DNA repair and recombination proteins [BR:xfm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     Xfasm12_0954
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     Xfasm12_0954
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      Xfasm12_0954
SSDB
Motif
Pfam: Exonuc_X-T_C RNase_T
Other DBs
NCBI-ProteinID: ACA11930
Position
complement(1032951..1034417)
AA seq 488 aa
MHSSPQILRTMPPSFLFYDLETFGQDPRRTRIAQFAAVRTDTQLNVIEEPISFLVKPADD
LLPSPYATLITGITPQHAQREGISEVAAFAHITMQMTQPHTCSLGYNTLRFDDEFIRYGL
FRHFYDPYEREWRNGNSRWDLLDMLRLMHALRPEGIHWPTREDGAPSFKLEHLALANHAR
EGTAHEALSDVYATISMARKFRAAQPRLWNYALQLRDKRFCANLLDITSIQPVLHISQRY
PATQHCAAAVLPLTTHPHINNRIIVFDLNGDIDTLLRLSAEDIADHLYTPALDLPEGEQR
IPLKEVHLNKVPALIAWNHLRASDFTRLGLNPAMLETKAAQLRACGPDLAEKVRHVFSHT
YNTANDADASLYDGFLTEEDRRLLPQLRASPADTLATFEQRLRDPRLIELLFRYRARNFP
ETLSCDEQTRWDTYRRRRLTTDTGLSELTFDQYHAQIAELRITHSQDATKQTLLDQLAAW
GSELSRTL
NT seq 1467 nt   +upstreamnt  +downstreamnt
atgcattcctctccacagatcctacgcacgatgccccccagctttctgttctacgactta
gaaactttcggtcaggacccccgtcgtacccgcatcgcacagtttgccgcagtacggacg
gacacccaattaaacgtcatcgaagaaccaattagtttcctcgtcaaacccgccgatgac
ctgctcccctcaccctacgccacactcatcaccggaattaccccgcaacacgcacaacgt
gaaggcatcagcgaagtcgcagccttcgcgcacattacaatgcagatgacacaaccacac
acctgctccctcggctacaacacgctacgtttcgacgacgaattcatccgctacgggcta
ttccgtcacttctacgacccatacgaacgcgagtggcgcaacggcaattcacggtgggac
ctgctggacatgctgcgactcatgcacgcactacgcccagaaggcatccactggccaaca
cgtgaagacggtgccccctcattcaaactcgaacacctagcccttgccaaccatgcacgc
gaaggcacagcacacgaagcattatcagatgtctatgccaccatcagcatggcgcgtaaa
ttccgcgccgcacaaccgcgcctctggaattacgcactgcaactgcgtgacaaacgcttt
tgcgccaacctgctcgacatcacctcaatacaaccagtactgcatatctcacagcgctat
cctgccacacaacactgcgccgccgccgtgctgccactgaccacacacccacacatcaac
aaccgcatcattgttttcgacttgaacggcgacatagacacactgctgcgcctgtctgca
gaagacatcgccgaccacctgtacaccccagccctggatttacccgaaggcgagcaacgt
atcccactgaaagaagtccacctaaacaaagtaccggccctgatcgcctggaaccacctg
cgtgcatcggacttcacacgccttggcctgaacccggccatgctagaaaccaaagcggca
caactgcgcgcatgcggaccggatttggccgaaaaagtccgccacgtcttcagccatacc
tacaacaccgccaacgacgctgatgcttcactgtacgacggctttctcaccgaagaggac
cgccgcctcctgccacaactacgcgcctcccctgctgacaccttggcgacgttcgaacag
cgccttcgcgatccacgtctcatcgaactgctgttccgctaccgcgcacgtaattttcca
gaaaccctctcttgcgacgaacagacacgctgggacacctatcggcgacgccgtctgacc
accgacaccggcctatcagaactcaccttcgaccaataccacgcccaaattgcggaatta
cggataacgcactcccaagatgccaccaaacagaccctattggaccaactcgccgcctgg
ggctccgaactatcccgcaccctatga

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