KEGG   Xanthomonas fragariae: BER92_09820
Entry
BER92_09820       CDS       T04667                                 
Name
(GenBank) type IV secretion protein Rhs
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
xfr  Xanthomonas fragariae
Pathway
xfr03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:xfr00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    BER92_09820
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:xfr02044]
    BER92_09820
Secretion system [BR:xfr02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   BER92_09820
SSDB
Motif
Pfam: Phage_GPD DUF2345 T6SS_Vgr Phage_base_V DUF6484
Other DBs
NCBI-ProteinID: AOD14986
UniProt: A0A1Y6HJI7
Position
complement(2149619..2152360)
AA seq 913 aa
MDPVATVLSALSAAPQQQERLLRLHTPLGPDVLVAETLDGRESVDGGGFHFEVSALSANA
GLPLDALLCQPVLLELLTAESRTALRPFHGHVTAFERLGSNGGLARYRLRIEPWLALLGQ
RMDSYVFQNMSVVEIAESVFADYVEQGALAPAWRWELSDRSVYAKRSLTTQYEETDLAFV
QRLLAEEGIYVWFAHAGDAGSERLGSHTLVLSNHNHAFAELGTVRYHRTDVTEQQDSVQQ
WVRSCRWRPTTLSRASWDYRSRSLRPAGADATPLGDIGAEDVDTAGPYGWQDSTRGQRRA
QQQLDAQQVAAQTIEGQGSWRQLAPGTRFGLRQHAGVAADARFLCLQVRHRARNTLGAEV
FDALEQSLGDVAVAGAPLPPALAGLSRGYAVPQDETAVAFYRNQFTAIPATATYRPQTED
GHGVHLHPKPTVAGTLSAIVVSDGDPVQSDRDHRIKVQFPFQRGADASSALAHPAGEDNA
PGSASAWTWVRVMTPWAGDNWGGVVLPRKGQEVLVGFLEGDIDRPVVIGSVYNGRGQDEA
AHNQVGGGGAGATGNAPAWFQGNAHGAVFTGFKSQALAQSQDGTGGYQQLRLDDTPGQGR
AQLSTTQHASTLTLGHLKGGSDNLREGERGYGAELSTQAYGAVRAGQGLLLSSAAGQQQL
AASEALAQLEQGEQLLQGLAEAARQQQAQLPNDPDRLPAQDGLKTLQASLKATQGGSADG
QAPGWSRPALLGSGSAGVMSLTPADQVWVSGTQTTLLAGTALNWASQAQLVLAVAGGLVL
YTQGSAPVAGSPNQERGIALHAAQGTLSARAHKNLAKLAAKTQVKLVSTTADLQLAAPTK
HLLATAAGAYIKLDGDDIELGAPGTIEFKGGQQVWTGPQGFSTRVQLPSADKPVCLECMR
DLASRHEAVASRG
NT seq 2742 nt   +upstreamnt  +downstreamnt
atggacccggtcgccacagtactttccgccctgagcgccgccccgcagcagcaagaacgc
ctgctgcggttgcacaccccgctgggccccgatgtgctggtcgccgagaccctggacggc
cgcgagtcggtcgacggcggtggcttccatttcgaagtgagcgcgctatcggccaacgcc
ggcctgccgctggacgcgctgctctgccagccggtactgctggaactgctcaccgccgaa
tcgcgcaccgcgctgcgcccgttccacggccatgtcaccgcgttcgaacggctcggcagc
aacggcggcctggcgcgctaccggctgcggatcgagccgtggctggcgctgctgggccag
cgtatggacagctacgtgttccagaacatgagcgtggtggagatcgccgagagcgtgttc
gccgactacgtcgagcaaggcgcgctggcgccggcgtggcgctgggagctgtccgaccgc
agcgtgtacgccaagcgcagcctgaccacgcagtatgaggagaccgacctggccttcgtg
cagcggctgctggccgaggaagggatctatgtctggttcgcgcatgccggcgatgccggc
agcgagcgcctgggcagccacaccctggtgctgtcgaaccacaaccacgccttcgccgag
ctgggcacggtgcgctatcaccgcaccgacgtcaccgagcagcaggacagcgtgcagcag
tgggtgcggtcgtgtcgctggcgcccgaccacgctgtcgcgggccagctgggactaccgc
agccgcagcctgcgcccggccggcgccgacgccacgccgttgggcgacatcggcgccgag
gacgtggacaccgccggcccctatggctggcaggacagcacgcgcggccagcgccgcgcg
cagcagcaactcgatgcgcagcaggtggcggcgcagaccatcgagggccagggcagctgg
cgccagctggccccgggcacgcgctttggcctgcgccagcatgcgggcgtggcggccgat
gcgcggttcctgtgcctgcaggtgcggcaccgggcgcgcaacaccctgggcgcggaggtg
ttcgatgcgctggagcagtcgctgggcgatgtggcggtggccggggcgccgctgccgcca
gcgctggccggcctgagcagggggtatgcggtgccgcaggacgagacggcggtggcgttc
taccgcaaccagttcaccgcaataccggccaccgcgacataccggccgcagaccgaggac
ggccatggcgtgcacctgcatcccaagccgacggtggccggcacgctgagcgcgatcgtg
gtcagcgacggcgacccggtgcagtccgaccgcgaccaccggatcaaggtgcagttcccg
ttccagcgcggtgccgatgccagcagcgcgctggcgcacccggccggggaggacaacgcg
ccgggcagcgcgtcggcgtggacctgggtgcgggtgatgacgccgtgggccggggacaac
tggggcggcgtggtgctgccgcgcaagggccaggaagtgctggtggggttcctggaaggg
gacattgaccggccggtggtgatcggcagcgtctacaacgggcgcggccaggacgaggcg
gcgcacaaccaggtcggcggcggcggggccggggccacgggcaatgcgccggcgtggttc
cagggcaacgcgcacggcgcggtgttcaccgggttcaagagccaggcgctggcgcagagc
caggacggcaccggcggctaccagcaactgcggctggacgacacccccggccagggccgc
gcgcagctgtcgaccacccagcacgccagcaccttgaccctgggccacctgaagggcggc
agcgacaacctgcgcgaaggcgagcgcgggtacggggcggaactgtccacccaggcctac
ggcgcggtgcgcgccggccagggcctgctgctgagcagcgcggcgggccagcagcagctg
gcggcgagcgaggcgctggcgcagctggaacagggcgagcagctgctgcaggggctggcc
gaggcggcccggcaacagcaggcgcagctgcctaatgacccggaccgcctccccgcccag
gacgggctcaagaccctgcaggccagcctgaaggcgacgcagggtggaagcgccgacggc
caggcgccgggctggagccgcccggcgctgctgggcagcggcagcgcgggcgtgatgagc
ctgaccccggccgaccaggtgtgggtgtcgggcacgcagaccacactgctggccggcacc
gccttgaactgggccagccaggcgcagctggtgctggcggtggccggtgggctggtgctg
tacacccagggcagcgccccggtcgccggcagccccaaccaggagcgcggcatcgccctg
cacgccgcgcaaggcacgctcagcgcccgcgcgcacaagaacctggccaagctcgcggcc
aagacgcaggtcaaactcgtcagcaccaccgccgacctccagctcgccgcgccgaccaag
cacctgctggccacggccgccggcgcctacatcaagctggacggcgacgacatcgaactg
ggcgcgccggggacgatcgagttcaagggcgggcagcaggtgtggacggggccgcagggc
tttagcacccgcgtgcagctgccctcggcggacaagccggtgtgcctggaatgcatgcgc
gatctggcgtcccggcacgaagccgtcgcatctcgcggatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (13)   

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