KEGG   Xanthomonas fragariae: BER92_12215
Entry
BER92_12215       CDS       T04667                                 
Name
(GenBank) RNA polymerase subunit sigma
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
xfr  Xanthomonas fragariae
Brite
KEGG Orthology (KO) [BR:xfr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:xfr03021]
    BER92_12215
Transcription machinery [BR:xfr03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     BER92_12215
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4_2 Sigma70_r4 Sigma70_ECF HTH_24 CMV_US
Other DBs
NCBI-ProteinID: AOD15358
UniProt: A0A1Y6H8Y9
Position
2682836..2683399
AA seq 187 aa
MSAIPGPDDDETGRLLTATAGGDRHAFEALYRQTSPKLFGVCLRMIPQRAEAEEVLQDVF
TLIWHKAGQFDPSRARGLTWLAMIARNRAIDHLRANAPQRRNVALEDAGELRANDASPLD
RTERASTRRRIDHCLAELEPPRSQLIRTAFFEGITYEELAARTDTPLGTVKSLIRRGLAK
LKACLER
NT seq 564 nt   +upstreamnt  +downstreamnt
atgagtgccattcctggccccgacgacgatgaaaccggacgcctgctgaccgcaaccgcg
ggcggcgaccggcatgccttcgaagcgctgtaccggcagacctcgcccaaactgttcggg
gtgtgcctgcgcatgatcccgcaacgcgccgaagccgaagaagtgctgcaggacgtgttc
acgctgatctggcacaaagccgggcagttcgatccgagccgtgcccgcggactcacctgg
ctggcgatgatcgcgcgcaacagggcgatcgaccatctacgcgccaacgcgccgcaacgc
cgcaatgtggcgctggaggatgctggcgaactgcgcgccaacgatgcctcgccgctggat
cgcaccgagcgtgccagcacgcgtcgccgtatcgaccattgcctggccgaactcgaaccg
ccgcgcagccagttgatccgcaccgcgttcttcgaaggcatcacttacgaagagctggcc
gcgcgcaccgacacaccgctcggcacggtcaagagcttgatccgccgcgggctggccaaa
ctcaaggcatgtctggaacgatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (13)   

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