KEGG   Xanthomonas fragariae: BER92_18165
Entry
BER92_18165       CDS       T04667                                 
Name
(GenBank) D-alanyl-D-alanine dipeptidase
  KO
K08641  zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
Organism
xfr  Xanthomonas fragariae
Pathway
xfr01502  Vancomycin resistance
xfr02020  Two-component system
Brite
KEGG Orthology (KO) [BR:xfr00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    BER92_18165
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    BER92_18165
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:xfr01002]
    BER92_18165
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:xfr01011]
    BER92_18165
  09183 Protein families: signaling and cellular processes
   01504 Antimicrobial resistance genes [BR:xfr01504]
    BER92_18165
Enzymes [BR:xfr01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.13  Dipeptidases
    3.4.13.22  D-Ala-D-Ala dipeptidase
     BER92_18165
Peptidases and inhibitors [BR:xfr01002]
 Metallo peptidases
  Family M15: zinc D-Ala-D-Ala carboxypeptidase family
   BER92_18165
Peptidoglycan biosynthesis and degradation proteins [BR:xfr01011]
 Peptidoglycan biosynthesis and degradation
  Carboxypeptidase
   BER92_18165
Antimicrobial resistance genes [BR:xfr01504]
 Gene sets
  Vancomycin resistance modules
   Vancomycin resistance, D-Ala-D-Lac type [MD:M00651]
    BER92_18165
SSDB
Motif
Pfam: Peptidase_M15 VanY
Other DBs
NCBI-ProteinID: AOD16738
Position
complement(3960999..3961556)
AA seq 185 aa
MRYAGSNNFTGRVVPGYVAPTCYLLRPAAEALTRAARTLRAEGYRLQVFDCYRPVRAVQA
FVTWAADLQDQSTKAQYYPRVDKRALLGDYIAQTSGHSRGATLDLGLLVCRWGPCRAVDM
GTHFDFFDTRAHTDSPGISVAQRAHRQRLLRALAAEGFANYPTEWWHFTFRPEPTPDTAY
DVPVD
NT seq 558 nt   +upstreamnt  +downstreamnt
atgcgctatgcgggcagcaataacttcaccgggcgtgtagtgccaggctatgtggcgccg
acgtgctatctgctgcggccggctgccgaggcattgacgcgggcggcgcgcacgctaagg
gccgaagggtatcggttgcaggtgttcgattgctatcgaccggtgcgggcagtacaggca
ttcgtgacctgggctgcggatttgcaggatcaatcgaccaaggcgcagtactacccacgt
gtagacaagcgtgcgctgctcggtgattacattgcgcagacgtccggacacagccgtggt
gcgacgctggacctggggttgctggtttgccggtggggtccgtgccgcgctgtggacatg
ggtacccacttcgattttttcgatacgcgtgcgcataccgattcgcccggtatcagcgtg
gcgcagcgtgcgcaccgtcagcgactgctgcgcgcactggcggccgaagggtttgccaac
tacccgacggaatggtggcatttcaccttccgtcccgaacccacccccgacaccgcctac
gatgtgccggtcgactga

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Ontology (5)   
   KEGG BRITE (5)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

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