KEGG   Xanthomonas citri pv. fuscans: XFF4834R_chr11540
Entry
XFF4834R_chr11540 CDS       T03094                                 
Name
(GenBank) putative ribosome biogenesis GTPase
  KO
K06949  ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
Organism
xfu  Xanthomonas citri pv. fuscans
Pathway
xfu00730  Thiamine metabolism
xfu01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:xfu00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00730 Thiamine metabolism
    XFF4834R_chr11540
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:xfu03009]
    XFF4834R_chr11540
Enzymes [BR:xfu01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.100  thiamine phosphate phosphatase
     XFF4834R_chr11540
Ribosome biogenesis [BR:xfu03009]
 Prokaryotic type
  GTPases
   XFF4834R_chr11540
SSDB
Motif
Pfam: RsgA_GTPase MMR_HSR1 ABC_tran AIG1 Dynamin_N Septin AAA_25 GTP_EFTU AAA_29 AAA_33 FeoB_N cobW Guanylate_kin DUF4350 AAA_16 AAA_22 Zeta_toxin AAA_28 VapE-like_dom SRPRB
Other DBs
NCBI-ProteinID: CDF60753
Position
1285514..1286605
AA seq 363 aa
MSDTSPDYPTLQSIGWPWPGPPEEAAWQAVFAAHPQALPARVVEQHRTGYVVADTPEASL
KAESLPEWQRPRFPSHERAAVGDWVLMEGKRIVALLPRRTSIKRGAAGEHYHQQVIAANI
DTVFIVCGLDADFNPRRIERYLLLVGGGGAQPVVVLTKADQTEYAEDALAVLEELEAQNI
PLRAVNARDPDSVAALRPWLGDGRTAVLVGSSGAGKSTLTNTLLGTQKMKTNAVRENDSR
GRHTTTHRALIPLPSGACLIDTPGMRELKPTGEEDLAEGGFSDVEALAAQCRFNDCAHVA
EPGCAVQAAIDAGELDPERVANYMKLRMEVASAAEKLAARVAQNNRGKGSGKRPASVDRP
GRR
NT seq 1092 nt   +upstreamnt  +downstreamnt
atgagcgacacatcccccgattaccccaccctccaatccattggctggccctggccgggg
ccgcctgaagaagcggcctggcaggcggtgtttgccgcgcatccgcaggcgctgccggcg
cgggtggtggagcagcaccgcaccggctatgtggtggccgatacgcccgaggccagcctg
aaggccgagtcgttgccggagtggcagcggccgcgctttcccagccatgagcgtgcggcg
gtgggcgactgggtgttgatggagggcaagcgcatcgtggcgctgctgccgcggcgcacc
tcgatcaagcggggagcggccggcgagcattaccaccagcaggtgatcgcggccaatatc
gatacggtgttcatcgtgtgcgggctggatgcggacttcaatccgcgtcgtatcgagcgc
tatctgttgctggtgggcggtggcggtgcgcagccggtggtggtgctgaccaaggccgat
cagaccgaatacgccgaagacgcgttggcggtgctggaagagctggaggcgcagaatatt
ccgttgcgcgcggtcaatgccagggatccggacagcgtggccgcgttgcggccgtggctg
ggcgatggccgcaccgcggtgctggtgggctcgtccggtgcgggcaaatcgaccctgacc
aatacgctgctcggcacgcagaagatgaagaccaatgccgtgcgcgagaacgattcgcgt
ggccggcataccaccacgcaccgtgcgttgattccgttgccgtccggggcgtgcctgatc
gacacgcccggcatgcgcgagctcaagccgaccggcgaagaggatctggccgaagggggt
ttttcggacgtggaggcgctggcggcgcagtgccgcttcaacgattgcgcgcatgtcgcc
gagccgggctgtgcggtgcaagcggcgatcgatgccggcgagctggacccggagcgggtg
gccaactacatgaagctgcgcatggaagtggccagcgcggccgaaaaactcgccgcccgt
gttgcgcagaacaatcgcggcaagggctcgggcaagcggccggccagcgtcgatcgtccc
ggacggcgctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (20)   
   Pfam (20)   
All databases (37)   

Download RDF
DBGET integrated database retrieval system