KEGG   Xanthomonas citri pv. fuscans: XFF4834R_chr39880
Entry
XFF4834R_chr39880 CDS       T03094                                 
Name
(GenBank) putative IcmF, type VI secretion system
  KO
K11891  type VI secretion system protein ImpL
Organism
xfu  Xanthomonas citri pv. fuscans
Pathway
xfu03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:xfu00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    XFF4834R_chr39880
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:xfu02044]
    XFF4834R_chr39880
Secretion system [BR:xfu02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   XFF4834R_chr39880
SSDB
Motif
Pfam: IcmF-related_N IcmF-related IcmF_C AAA_22 ABC_tran AAA_29 AAA_18
Other DBs
NCBI-ProteinID: CDF63389
Position
complement(4600713..4604237)
AA seq 1174 aa
MKTLLSKLSATVVVGLLALCLLSVLLWVGGPYVALAGWSPLSNVAARLLAIVLLLVVWVG
VLTLRRWRRQVRAATLSSALAAPGRDDDRELRSGQERAQLQARFQQAIQLLRKRRGGADL
YALPWYALIGPPGSGKSTLLQYSGLQFPLAARMGDAALRGVGGTRDCEWWFTDEAVFLDT
AGRYTTQDSDQAVDAGAWRDFLRLLRRHRPRRPLNGVLVTMSMSDLLLLDDAERDTHMQA
IRRRLDELAEQLQASVPVYLIFTKCDLIGGFGEFFDDLTPAQRNQVWGMTFTLAQTLDGH
AARRFADEFGVLQQQLSARLFERLNLERDRLRRAAILSFPQQVAALGERARQCVEGTFAG
NAYGPAPLLRGVYFTSGTQDGTPIDRMMGAVARTFGLEEARVQAPGAQRRTFFVERLLRE
VVLRESGLANTPPAQQRRRAWLQAAAYAGVALLTGAVLAGLGLSYLGNRAYLQQVRAALD
ARPAVPDPNAATRMPEYVARTLQQADATQAVVKVAQQYHAGAPWALRMGLFQGQALGEQV
QAGYLRQLNATLLPALAVRLRTGLVDNAQAPQALYYTLKGYLMLGQPQHLDPAQLSALAA
IEAEKLFPREPALQQALGAHLQAVLESPTHVRALSLDNQRIAQARASLRAADLSTLIYGN
LLLTPPDGTPLRLDKALGLLADTFVRRSGTALSTPVPALYTQPVFAALQREGIGQAVERF
GRDDWVFGGTALDASAKATLVREVGQRYTADYIRFWDALLADLQLRPSADLAGASATAAK
LAGPSSPLRLLLGVVGEHTQAMERAPPADPAQRALAAAASSAGAKANAAAAKLPGGAAMS
AALATPADGAATATPAPGAAISEHFLALNALAAGAPGSTPLDHLLSVLDQLGKQLLVISQ
GGGDAAAANAQLALARQEMAQLPPPVTDWLQSLAGSSATLMTQGARAALDAQVRQSVGEV
CTDFVRGRYPFDPEAQVEIPLQNFGELFGSGGRLETLYTGTVEPLLDTQSPQWRWKDGPD
AVIGAPGLPVQLQLAQRIRQKYFRGGPTPQIGFTVLAPTLGEGVARLTLDIEGQRYDYQP
GAAQSMPMIWPGPVPGHVSIAAFGADGVALGTLDYQGDWALFRALQAGHLENPSDLRFVA
SFALGGHDVQVPLRAGNLRHPFLDSDVQHFVCGG
NT seq 3525 nt   +upstreamnt  +downstreamnt
atgaagacgctgttgtccaagctgagcgcaacggtggtggtcggcctgctggcgctatgc
ctgctgtcggtgctgctgtgggtgggtgggccgtatgtggcgctggccggctggagcccg
ctgagcaacgtggcggcgcggttgctggcgatcgtgttgctgctggtggtgtgggtgggc
gtgctgacgctgcgccgctggcgcaggcaggtgcgtgcggcgaccttgtccagcgcactg
gcggcgcccggccgcgacgacgaccgcgagctgcgcagcgggcaggaacgcgcgcagctg
caggcgcgctttcagcaggcgatccagttgttgcgcaagcggcgcggtggcgccgatctg
tacgcgttgccgtggtatgcgctgatcggcccgcccggttcgggcaagagcaccttgctg
cagtattcggggctgcagtttccactggccgcgcgcatgggcgatgcggcgttgcgcggc
gtcggcggcacccgcgattgcgaatggtggttcaccgacgaagcggtgttcctggatacg
gccgggcgctacaccacccaggattcggatcaggcggtggacgcgggtgcgtggcgcgat
ttcctgcgcctgctgcgacgccatcgcccgcgtcgcccgctcaacggggtgctggtgacg
atgagcatgtcggacctgttgctgctcgacgatgccgagcgcgacacgcatatgcaggcg
atccgccgccgcctggacgaactggccgagcaattgcaggccagcgtgccggtgtatctg
atcttcaccaagtgcgatctgatcggcggcttcggcgagttcttcgacgatctcacgccg
gcgcagcgcaaccaggtgtggggcatgacatttacgctggcgcagaccctggacgggcac
gcggcgcgcaggttcgccgacgaattcggcgtgctgcagcagcagctgagtgcgcgcctg
ttcgagcgcctgaacctggaacgcgaccgcctgcggcgtgcggcgatcctgtcgtttccg
cagcaggttgccgctcttggcgagcgtgcacggcaatgtgtcgaaggcaccttcgccggc
aatgcgtacggcccggcaccgctgctgcgcggggtgtacttcacctccggcacgcaggac
ggcaccccgatcgaccgcatgatgggcgcggtggcgcgcaccttcggcctggaagaagca
cgcgtgcaggcaccgggcgcgcaacgccgcaccttcttcgtcgagcggctgctgcgcgag
gtggtgctgcgcgaatccggcctggccaatactccgcccgcccagcagcgccgcagggcg
tggctgcaggccgccgcgtacgcgggcgtggcgttgctgaccggcgccgtgctggccggg
ttggggctcagctacctgggcaaccgtgcgtacctgcagcaggtgcgtgctgcactggac
gcgcggccggccgtgcccgatcccaatgccgccacccgcatgcccgagtacgttgcgcgc
accctgcagcaagcggatgcgacgcaggcggtggtgaaggtggcgcagcagtatcacgct
ggcgcgccgtgggcgttgcgcatggggttgttccagggccaggcgttgggcgagcaagtg
caggccggctatctgcgtcagctcaacgccaccttgttgccggccttggcggtgcgcctg
cgcaccggtctggtcgataacgcgcaggcgccgcaggcgctgtactacacgctcaagggc
tatctgatgctgggccagccgcagcatctggacccggcgcaactcagcgcgctggcggcg
atcgaagccgaaaaattattcccccgcgagcctgccttgcagcaggcgctgggtgcgcat
ctgcaggcggtgctggagtcgcccacgcacgtgcgtgcactgtcgctggacaaccaacgc
atcgcccaggcgcgtgccagcctgcgcgccgccgatctgtcgacactgatctacggcaac
ctgctgctgaccccgccggacggcacgccgttgcggctggacaaggcgctgggcctgctg
gccgacaccttcgtgcgccgcagtggcacggcgttgtccaccccggtgccggcgctgtac
acccagccggtgttcgcggccttgcaacgcgagggcatcggccaggcggtggaacgcttc
gggcgcgacgattgggtattcggcggtaccgcgctggatgcatccgccaaagccacgctg
gtgcgcgaagtggggcagcgctacacggccgattacatccgtttctgggatgcgttgctg
gccgatctgcaactgcgtccctcggccgatctggccggtgccagcgccactgccgccaag
ctggccgggcccagttcgccactgcggctgctgctgggcgtggtgggcgagcatacccag
gcaatggaacgtgcaccgccggcagaccccgcgcaacgcgcgctggcggctgccgccagc
tcggcgggcgccaaggcgaatgccgccgcggccaaacttcctggcggggcggcgatgagc
gccgcgctggccacgcccgccgatggtgccgccactgccacgccggcaccgggtgcggcg
atcagcgagcattttctcgcgctcaacgccttggccgccggcgcgccgggcagtacgccg
ctggatcacctgctgagtgtgctcgatcagctcggcaagcaattgctggtgatctcccag
ggcggcggcgatgccgcggcggccaacgcgcaactggcattggcccggcaggaaatggcg
caactgccaccgccggtgaccgactggctgcagagcctggccggcagcagcgccaccttg
atgacccagggcgcacgcgccgcactggatgcgcaggtcaggcaatcggtgggcgaggtg
tgcacggatttcgtgcgtggccgctacccgttcgatccggaggcgcaggtggagattccg
ctgcagaatttcggcgagttgttcggcagtggtgggcgtctggagacgctctacaccggc
accgtcgaaccgctgctggacacccagtccccgcaatggcgctggaaggacggcccggac
gcggtcatcggcgcgcccggcctgccggtgcaactgcaactggcgcaacggatccggcag
aaatattttcgcggcgggcccacgccgcagatcggctttaccgtgctggcgcccacgctg
ggcgagggcgtggcccggctgacgctggatatcgaaggccagcgttacgactaccagccc
ggcgcggcgcaaagcatgccgatgatctggcccggcccggtgccggggcatgtctccatc
gccgcgttcggcgccgatggcgtggcgctgggaacgctcgactaccagggcgactgggca
ttgtttcgtgcgctgcaggccgggcacctggaaaacccctcggatctgcgctttgtcgcc
agcttcgcgcttggcggccacgacgtgcaggtgccgctgcgtgccggcaacctgcgccat
ccgtttctggacagcgacgtccagcacttcgtgtgtggcggatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (14)   

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