KEGG   Xanthomonas hortorum pv. gardneri: BI317_00300
Entry
BI317_00300       CDS       T04668                                 
Name
(GenBank) DNA gyrase subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
xga  Xanthomonas hortorum pv. gardneri
Brite
KEGG Orthology (KO) [BR:xga00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:xga03032]
    BI317_00300
   03400 DNA repair and recombination proteins [BR:xga03400]
    BI317_00300
Enzymes [BR:xga01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     BI317_00300
DNA replication proteins [BR:xga03032]
 Prokaryotic type
  DNA Topoisomerases
   BI317_00300
DNA repair and recombination proteins [BR:xga03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      BI317_00300
SSDB
Motif
Pfam: DNA_gyraseB GyrB_insert DNA_gyraseB_C Toprim HATPase_c GyrB_hook Toprim_4 SMC_hinge
Other DBs
NCBI-ProteinID: APP82865
Position
71064..73508
AA seq 814 aa
MTEDQNTPTTPNSTYDSSKITVLRGLEAVRKRPGMYIGDVHDGTGLHHMVFEVVDNSVDE
ALAGHADDIVVKILVDGSVAVSDNGRGVPVDIHKEEGVSAAEVILTVLHAGGKFDDNSYK
VSGGLHGVGVSVVNALSEHLWLDIWRDGFHYQQEYALGEPQYPLKQLEASTKRGTTLRFK
PAVAIFSDVEFHYDILARRLRELSFLNSGVKIALIDERGEGRRDDFHYEGGIRSFVEHLA
QLKSPLHPNVISVTGEHNGIVVDVALQWTDAYQETMYCFTNNIPQKDGGTHLAGFRAALT
RVLSNYIEQNGIAKQAKVALTGDDMREGMIAVLSVKVPDPSFSSQTKEKLVSSDVRPAVE
NAFGARLQEFLQENPNEAKAITGKIVDAARAREAARKARDLTRRKGALDIAGLPGKLADC
QEKDPALSELFIVEGDSAGGSAKQGRNRKNQAVLPLRGKILNVERARFDRMLASDQVGTL
ITALGTGIGRDEYNPDKLRYHRIILMTDADVDGSHIRTLLLTFFYRQMPELIERGYIYIG
LPPLYKLKQGKSELYLKDDAALNAYLASNAVEGAALIPATDEPPITGEALEKLLMLFTGA
NEAIARNAHRYDPALMTALIDLPPLDVAKLQAEGDQHPTLDKLQAVLNRGTLGTARYQLR
FDPATDSTSATLVAVRKHMGEEFTQVLPMGAFESGELRPLREVALALDGLVREGAQIVRG
NKTHPITSFAQAHAWLLEEAKKGRQVQRFKGLGEMNAEQLWETTVNPDTRRLLQVRIEDA
VAADQIFSTLMGDVVEPRRDFIEDNALKVSNLDI
NT seq 2445 nt   +upstreamnt  +downstreamnt
atgaccgaagatcaaaacaccccgaccacacccaacagcacctacgattccagcaagatc
accgtgctgcgtggcctggaagccgtccgcaagcgccccggcatgtacatcggcgatgtc
catgacggcaccggcctgcatcacatggtgttcgaggtggtcgacaactcggtcgacgag
gccctggccggccatgccgacgacatcgtggtcaagatcctggtcgatggctcggtcgcc
gtgtcggataacggccgcggcgtgccggtcgacatccacaaggaagaaggcgtgtcggcg
gcggaggtgatcctcaccgtgctgcatgccggcggcaagttcgacgataacagttacaag
gtttccggcggcctgcacggcgtgggcgtgtcggtggtcaacgcgctgtccgagcacctg
tggctggacatctggcgcgacggcttccactaccagcaggaatacgcgctgggtgagccg
cagtacccgctcaagcaactcgaagcctcgaccaagcgcggcaccacgctgcgcttcaag
ccggccgtggccatcttcagcgacgtcgagttccattacgacatcctggcgcgccgtctg
cgtgagctgtcgttcctcaattccggcgtcaagatcgcgctgatcgacgaacgtggcgaa
ggccgccgcgacgatttccattacgaaggcggcatccgcagcttcgtggagcatctggcc
cagctgaagtcgccgctgcaccccaacgtgatctcggtgaccggcgagcacaacggcatc
gtggtggacgtggccctgcagtggaccgacgcctaccaggaaaccatgtactgcttcacc
aacaacatcccgcagaaggatggcggcacccatctggccgggttccgcgcggcgctgacg
cgcgtgctcagcaattacattgagcagaacggcatcgccaagcaggccaaggtcgccctg
accggcgacgacatgcgcgaaggcatgatcgcggtgctgtccgtcaaggtgcccgacccc
agcttctcctcgcagaccaaggaaaagctggtcagctcggacgtgcgtccggcggtggaa
aacgccttcggtgcgcgcctgcaggagttcttgcaggaaaacccgaacgaagccaaggcc
atcaccggcaagatcgtcgacgccgcgcgtgcgcgcgaagccgcgcgcaaggcgcgcgat
ctgacccgccgcaagggtgcgctggacatcgccggcctgcccggcaagctcgccgactgc
caggaaaaggacccggcgctgtcggaactgtttatcgtcgagggtgactcggcaggtggt
tcggccaagcagggccgtaaccgcaagaaccaggcggtgctgccgttgcgcggcaagatt
ctcaacgtcgaacgcgcgcgtttcgaccgcatgctggcctccgaccaggtcggcacgctg
atcaccgcgctcggcaccggcatcggtcgcgacgagtacaacccggacaagctgcgctac
caccgcatcatcctgatgaccgacgccgacgtcgatggctcgcacatccgcaccctgctg
ctcacgttcttctaccggcagatgccggagctgatcgagcgcggctacatctacatcggc
ttgccgccgctgtacaagctcaagcagggcaagagcgagctgtatctcaaggacgacgcg
gcgctcaacgcctacctggccagcaacgcggtcgagggcgcggcgctgatccccgccacc
gacgagccgccgatcaccggcgaggcgctggagaagctgctgatgctgttcaccggcgcc
aacgaagcgatcgcgcgcaatgcgcaccgctacgacccggcgctgatgaccgccttgatc
gacctgccgccgctggacgtggcaaagctgcaggccgaaggcgaccagcatcccaccctg
gacaagctgcaggcggtgctcaaccgcggcaccctgggcacggcgcgctaccagctgcgc
ttcgacccggccaccgatagcacctccgccacgctggtggcggtgcgcaagcacatgggc
gaggaattcacccaggtgctgccgatgggcgcgttcgaaagcggcgaactgcgtccgttg
cgcgaggtggcgctggcgctggatggtctggtgcgcgaaggtgcgcagatcgtgcgcggc
aacaagacccacccgatcaccagcttcgcgcaggcgcatgcctggttgctggaagaggcc
aagaagggccgccaggtgcagcgcttcaagggcctgggcgaaatgaacgccgaacagctg
tgggaaaccacggtcaacccggatacgcgtcgcttgctgcaggtacgcatcgaagacgcg
gtggccgccgatcagatcttcagcaccttgatgggcgatgtggtcgaaccacgccgcgat
ttcatcgaggacaacgcgctgaaggtgtccaacctggatatctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (17)   

Download RDF
DBGET integrated database retrieval system