KEGG   Xanthomonas hortorum pv. gardneri: BI317_11315
Entry
BI317_11315       CDS       T04668                                 
Name
(GenBank) pectate lyase
  KO
K01728  pectate lyase [EC:4.2.2.2]
Organism
xga  Xanthomonas hortorum pv. gardneri
Pathway
xga00040  Pentose and glucuronate interconversions
xga01100  Metabolic pathways
xga02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:xga00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    BI317_11315
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    BI317_11315
Enzymes [BR:xga01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.2  pectate lyase
     BI317_11315
SSDB
Motif
Pfam: Pectate_lyase_4
Other DBs
NCBI-ProteinID: APP84667
Position
complement(2440436..2441569)
AA seq 377 aa
MHFSIISLFLAFFIAQVGIAKAGTGGFSSASVSGETAITVTTLAELQAAFNAKNHHIIIR
GKIYGGPKLTTLNFSSTAWNNITIEGAAGGGAALQNIQLKFSGEKLPAGTNIQNVVIRNI
SFSGNVGDLQALPDQVEGTSNNIGINYVGVSLRRISNAWIDHCDFYDMSDDLLSVGRSSD
YITLSYNHFYFSNSWVNMNPDPVWNWVDKNYHDLANERLAILVGHNRNDSYVYGGNKLHV
TMHHNWFGPNLAGRPLLRGWVHAYNNYFDNSTLPNGMRTAADGRRYEKQQYNALQVGSGS
IVFSESNYFYKTNNSNQIRLESSGDMYNFYEKKNVYDAATGNSAIGSTFNNAPVKYSYKS
DDAARVPSIVLSTAGPH
NT seq 1134 nt   +upstreamnt  +downstreamnt
ttgcatttctctattatctcgctgtttcttgctttttttatcgcacaggttggtatcgcc
aaggctggaaccggtggattttcttcagcgtctgtatctggcgagactgcgattacagtg
acaacgcttgcagagctgcaagcggcattcaatgccaaaaaccatcatatcatcatccgt
ggaaagatctacggcggcccaaaattgaccaccctgaatttctccagcacagcttggaac
aacataacaatcgagggtgctgcaggcggtggcgcggctttgcagaatatccaattgaaa
tttagcggcgagaagctgcccgccgggacaaacattcaaaacgtggttatcagaaacatc
tcattctctggcaatgtcggcgacttgcaagccttgcctgaccaagtcgaaggaacttcc
aacaacattggcatcaactacgtgggcgtatcattgcggcgtatatccaatgcttggatc
gaccactgcgatttctacgacatgagcgatgatcttttatcagtcggcaggtcatctgat
tacatcacgctgtcgtacaatcacttctacttcagcaacagctgggtcaacatgaatccg
gatccggtatggaactgggtcgataaaaattatcatgacctcgcaaatgagcgcttggca
atccttgttggtcacaacaggaatgactcatatgtatatggtggcaataagctgcacgtg
acgatgcaccacaactggtttggccccaatcttgccgggcgccccctactccgcggttgg
gtccatgcctacaataactactttgacaatagcaccttgcccaatggtatgcgcaccgct
gccgatggtcgccgctatgaaaagcagcagtacaacgctttgcaggtaggtagcggcagc
attgttttttccgaatcaaactatttttacaaaaccaataatagcaaccagattcgactg
gaatcaagcggggacatgtacaatttctacgagaaaaaaaacgtgtatgacgcagcaacc
ggcaattcggcgatcggctcaaccttcaataatgcgccggtgaaatacagctacaagtct
gatgatgcggcaagagtccccagcatcgttctatccaccgcggggccgcactaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (15)   

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