KEGG   Xanthomonas hortorum pv. gardneri: BI317_25055
Entry
BI317_25055       CDS       T04668                                 
Name
(GenBank) hypothetical protein
  KO
K03530  DNA-binding protein HU-beta
Organism
xga  Xanthomonas hortorum pv. gardneri
Brite
KEGG Orthology (KO) [BR:xga00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:xga03032]
    BI317_25055
   03036 Chromosome and associated proteins [BR:xga03036]
    BI317_25055
   03400 DNA repair and recombination proteins [BR:xga03400]
    BI317_25055
DNA replication proteins [BR:xga03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    BI317_25055
Chromosome and associated proteins [BR:xga03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    BI317_25055
DNA repair and recombination proteins [BR:xga03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      BI317_25055
SSDB
Motif
Pfam: Bac_DNA_binding HU-CCDC81_euk_1 HU-HIG
Other DBs
NCBI-ProteinID: APP87333
Position
pICMP7383.1:166412..166690
AA seq 92 aa
MNRKDLVELLAHELDLPKHKTTRLVAMLFEAIVAQLGKGREVNISGFGVFGSEPVTIHAA
STRRLAPSLQSTHTIRRPTFRPSDGLTRKLSK
NT seq 279 nt   +upstreamnt  +downstreamnt
atgaacaggaaagacctggtggaacttctggcgcacgaactggacctgccgaagcataag
acgacgagattagttgcaatgttgttcgaagccatcgttgcccagctcggcaaggggcgg
gaagtgaacatcagtggctttggtgtgttcggcagcgaaccggtgaccatccacgctgcc
agcacccgtcgcttggcgccttcgttgcaatctacgcacacgatccgccggccgaccttc
cgtccaagcgacggcctaacgcggaagttgtccaaatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (11)   

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