KEGG   Xenorhabdus hominickii: A9255_09340
Entry
A9255_09340       CDS       T04538                                 
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
xho  Xenorhabdus hominickii
Pathway
xho03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:xho00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    A9255_09340
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xho03400]
    A9255_09340
DNA repair and recombination proteins [BR:xho03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     A9255_09340
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      A9255_09340
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII UVR DEAD UvrD-helicase UB2H SBDS_domain_II AAA_22 AAA_30 DUF87 DUF3848
Other DBs
NCBI-ProteinID: AOM40780
UniProt: A0A2G0QAP0
Position
complement(1924631..1926670)
AA seq 679 aa
MSKETSKETGKVFKLHSDFEPGGDQPSAISQLQEGLEDGLAHQTLLGVTGSGKTFTIANV
IANLNRPAMILAPNKTLAAQLYSEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKD
ASVNEHIEQMRLSATKALLERRDVVVVASVSAIYGLGDPDSYLKMMLHLTEGMLIDQRAI
LRRLAELQYTRNDQAFQRGTFRVRGEVIDIFPAESNEHALRVELFDDEVERLSLFDPLTG
QVQYNVPRYTIYPKTHYVTPRERILQAMEEIKVELEQRRKVLLASDKLLEEQRITQRTQF
DLEMMNELGYCSGIENYSRYLSGRSAGEPPPTLFDYLPADGLLVVDESHVTIPQIGGMYR
GDRSRKETLVEYGFRLPSALDNRPLRFEEFESLAPQSIYVSATPGHYELEKSGNEVVEQV
VRPTGLIDPEVEVRPVATQVDDLLSEIRIRAVKNERVLVTTLTKRMAEDLTEYLEEHGER
VRYLHSDIDTVERVEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSE
RSLIQTIGRAARNLHGKAILYGDRITNSMAKAIEETERRRAKQQAFNEEHGIVPKGLNKK
IGDILRIGQPVNGKGKNKGKNKVAVGTDDYRTLSAKELESKIRELEDKMYQHARDLEFEQ
AANIRDQVQALRTQFITNS
NT seq 2040 nt   +upstreamnt  +downstreamnt
atgagcaaagaaacgagcaaagaaacgggcaaggtcttcaagctacattctgattttgaa
ccgggaggcgatcagccatcggctatcagtcagttacaggaagggttggaagatggcttg
gctcatcagactcttttgggggtcacagggtcaggtaaaactttcacgatagccaatgtg
attgcaaacttgaatcggccagccatgatcttagcccccaataaaacattggcggcacag
ctttatagcgaaatgaaagaattcttcccagaaaacgcggtggaatattttgtctcctac
tatgattactatcaaccagaagcttatgtccccagttctgatacttttattgaaaaagat
gcttcagtgaatgagcatattgagcagatgcgtctgtcagccacaaaagctttactggag
cgccgggatgttgttgttgtggcttctgtttccgcaatttatggtctgggagatcccgat
agctatctgaaaatgatgcttcacttaaccgagggcatgttaattgaccagcgtgctatt
ttgcgtcgtttggcggaactgcaatacactcgcaacgatcaggcattccagcgcggaaca
ttccgggttcgtggtgaagtgattgatatttttcccgcagaatcgaatgagcacgcgttg
cgcgttgaattgttcgacgatgaagtggagcggctgtctctatttgatccactgacaggc
caagtgcaatacaatgtaccgcgttatactatttaccccaagacccactatgtaacaccg
cgtgaacgtatccttcaggcgatggaagaaatcaaagttgaactcgaacaacggcgcaaa
gtgctgctggcatcagataagttattagaagagcaacgtattactcagagaacacaattc
gatctcgaaatgatgaatgaactgggctactgctcaggtattgaaaactactcccgttac
ctgtctggccgttctgcgggtgagccacctcctacactgtttgattatctgcctgcggat
ggtttgttggtggtagatgaatctcatgtcaccattcctcaaattggcggcatgtaccgc
ggagatcgctcccgtaaggaaacgttggtggaatatggttttcgtttgccatctgcgttg
gataaccgtccattgcgattcgaggaatttgaatcactggcaccacagagtatttacgtt
tcagccactcccggtcactacgaattggaaaaatccggtaatgaagtggttgaacaggtt
gtgcgtccgacggggctgattgaccctgaagttgaagttcgaccagtggcaactcaagtg
gatgacctgctgtctgaaattcgtatccgtgccgtgaaaaatgagcgagtattggtcacg
accctgactaaacgaatggcagaagatttaaccgaatatttggaagagcatggcgaacga
gtgcgttacctccattcagatattgatactgttgaacgtgtggaaattatccgtgatctt
cgtttgggggaatttgatgtcttggttggtattaacttgcttcgtgaaggcttggatatg
ccggaagtctctcttgtagcgattttagatgctgacaaagaggggttcctccgttctgag
cgctctttaatccagactatcggccgcgcagcgcgtaacctgcatggtaaggctatcttg
tatggtgacagaattactaactctatggcgaaagctattgaagaaacagagcgccgccgt
gccaaacagcaggcatttaacgaagagcacggtattgtaccgaaaggactaaacaagaaa
attggcgacattctgcgaattggtcagcccgtcaatggcaaagggaaaaataaaggaaaa
aacaaagttgctgtgggtacggatgactaccgtacattgtcagcgaaagagttggagagc
aaaatccgtgagttggaagataaaatgtaccagcatgcaagggatcttgaattcgaacag
gctgccaacattcgcgatcaagtacaggcattgcggacacaatttatcaccaattcctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (13)   
   Pfam (13)   
All databases (21)   

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