KEGG   Xanthomonas hortorum: XJ27_04730
Entry
XJ27_04730        CDS       T05082                                 
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
  KO
K00239  succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
Organism
xhr  Xanthomonas hortorum
Pathway
xhr00020  Citrate cycle (TCA cycle)
xhr00190  Oxidative phosphorylation
xhr00650  Butanoate metabolism
xhr01100  Metabolic pathways
xhr01110  Biosynthesis of secondary metabolites
xhr01120  Microbial metabolism in diverse environments
xhr01200  Carbon metabolism
Module
xhr_M00009  Citrate cycle (TCA cycle, Krebs cycle)
xhr_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
xhr_M00149  Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:xhr00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    XJ27_04730
   00650 Butanoate metabolism
    XJ27_04730
  09102 Energy metabolism
   00190 Oxidative phosphorylation
    XJ27_04730
Enzymes [BR:xhr01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.5  With a quinone or related compound as acceptor
    1.3.5.1  succinate dehydrogenase
     XJ27_04730
SSDB
Motif
Pfam: FAD_binding_2 Succ_DH_flav_C DAO Thi4 GIDA Pyr_redox_2 FAD_binding_3
Other DBs
NCBI-ProteinID: ASW45359
Position
complement(1105033..1106823)
AA seq 596 aa
MSAYKITEHKYDMVVVGAGGAGLRATFGLAQKGLQTVCLTKVFPTRSHTVAAQGGISAAL
GNMGEDDWRYHFYDTIKGSDWLGDQDAIEYMCREAIPAIIELEHYGVPFSRTEEGKIYQR
PFGGMTTKYGEGPSAQRTCAAADRTGHAMLHTLYQQSLAHNARFMIEYFALDLIFDEEGV
CRGVLALDMADGTLHLFRAHGVVLATGGYGRAYFSATSAHTCTGDGGGLVMRAGLPVQDM
EFVQFHPTGIYGAGCLITEGVRGEGGILRNSNGERFMERYAPHYKDLASRDVVSRSMTVE
IREGRGVGEHKDHILLDLTHLGPEVINEKLPGIAESAHIFAGVDVTKQPIPVLPTVHYNM
GGIPTNFYGEVVRKQGDDPDAVVPGLYAIGEAACVSVHGANRLGSNSLLDLVVFGRAVAN
RCAETVKPNQPHKTLPSDACDKALGLLDKLRYANGSTPTSVIRDNMQRTMQSDAAVFRTS
KTLKEGVDKMAEIFATFEDVKVSDRSLVWNSDLIETYELNNLLLNAVATINSAEQRKESR
GAHSHEDFPDRDDVNWQKHTLVTVDDKGKCEFEYRPVHMYTLSQDVDVVPPKPRVY
NT seq 1791 nt   +upstreamnt  +downstreamnt
atgtccgcttataagattacggaacacaagtacgacatggtcgtggtgggcgccggtggc
gccggactgcgcgccacgttcggcctggcccagaagggcctgcagacggtctgtctgacc
aaggtcttcccgacccgctcgcacaccgtggcagcgcagggcggtatttccgccgcgctc
ggcaacatgggcgaagacgattggcgctaccacttctacgacaccatcaaaggctccgat
tggctgggcgaccaggacgcgatcgagtacatgtgtcgcgaggcgatcccggccatcatc
gagcttgagcactacggcgtgccgttctcgcgcaccgaagagggcaagatctatcagcgc
ccgttcggtggcatgaccaccaagtacggcgaaggcccgtctgcacagcgcacctgcgcg
gcggccgatcgtaccggtcacgccatgttgcacacgctgtatcagcagtcgctggcgcat
aacgcgcgtttcatgatcgagtactttgcgctcgacctgatcttcgacgaagaaggcgtc
tgccgcggcgtgcttgcgctggacatggccgacggcaccttgcatctgttccgcgcccac
ggcgtggtgctggcgaccggcggttatggccgtgcctacttcagcgccacctccgcccac
acctgtaccggtgacggcggcggcttggtgatgcgtgccggcctgccggtgcaggacatg
gagttcgtgcagttccatcccaccggcatttacggtgcgggctgcctgatcaccgagggc
gtgcgcggcgaaggcggcattctgcgcaacagcaacggcgagcgcttcatggagcgctac
gcaccgcattacaaggatctggcatcgcgcgacgtggtatcgcgttcgatgacggtggag
atccgcgaaggccgtggcgtgggcgagcacaaggatcacatcctgctcgacctgacccat
ctcggcccggaagtcatcaacgaaaaactgcccggcatcgccgaaagcgcccacatcttt
gccggtgtggacgtgaccaagcagccgatcccggtgctgccgaccgtgcactacaacatg
ggcggcattccgaccaatttctacggcgaagtcgtgcgcaagcagggcgacgacccggat
gcggtggtgcctggcctgtacgcgatcggcgaagccgcctgcgtgtcggtgcacggtgcc
aaccggttgggctccaactcgttgctggatctggtggtgttcggccgtgcggtggcaaac
cgctgcgccgagacggtcaagcccaaccagccgcacaagacgttgccttcagatgcctgc
gacaaggcgctcggcctgctggacaagttgcgctacgccaacggctctacgccgacctcg
gtgatccgcgacaacatgcagcgcaccatgcagtccgatgctgcggtgttccgcaccagc
aagacgctgaaggaaggcgtggacaagatggcagagatcttcgccaccttcgaagacgtc
aaggtgtccgaccgctcgctggtctggaactcggatctgatcgagacctacgagttgaac
aacctgctgctcaatgcggtggcgacgatcaattcggccgagcagcgcaaggaaagccgt
ggcgcgcattcgcacgaagacttcccggaccgcgacgacgtcaactggcagaagcacacg
ctggtcaccgtcgacgacaagggcaagtgcgagttcgaatatcgcccggtgcacatgtac
acgctgagtcaggacgtggatgtcgtcccgccgaagccgcgcgtctactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (13)   
   KEGG PATHWAY (7)   
   KEGG MODULE (6)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (32)   

Download RDF
DBGET integrated database retrieval system