KEGG   Xanthomonas hortorum: XJ27_07050
Entry
XJ27_07050        CDS       T05082                                 
Name
(GenBank) polyribonucleotide nucleotidyltransferase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
xhr  Xanthomonas hortorum
Pathway
xhr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:xhr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    XJ27_07050
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xhr03019]
    XJ27_07050
   03016 Transfer RNA biogenesis [BR:xhr03016]
    XJ27_07050
Enzymes [BR:xhr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     XJ27_07050
Messenger RNA biogenesis [BR:xhr03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     XJ27_07050
Transfer RNA biogenesis [BR:xhr03016]
 Prokaryotic type
  tRNA degradation factors
   XJ27_07050
SSDB
Motif
Pfam: RNase_PH RNase_PH_C S1 PNPase KH_1 KH_2 KhpA-B_KH S1_2 KH_5
Other DBs
NCBI-ProteinID: ASW45750
Position
complement(1634794..1636908)
AA seq 704 aa
MAKITKTFQYGKHTVTLETGEIARQAGGAVIVKFDDTVLLVTAVAAKSAREGQDFFPLTV
DYQEKFYAGGRIPGGFFKREGRATEKETLISRLIDRPIRPLFPEDYKNEVQIIATVMSMN
PDIDGDIAALIGASAALSLAGTPFNGPIGAAKVGYKNGEYILNPTISELKDSQLELVVAG
TANAVLMVESEAALLSEEVMLGAVTFGHRELQKVINVINELTVEAGTKPSTWVAPAKNTA
LINALKEAVGAQLSGAFQVRDKLQRRDAISAIKKDVLESLAGRVASEGWSSAELSKEFGE
LEYHTMRDSVLETKVRIDGRALDTVRPISVQAGILPRTHGSALFTRGETQAIVVTTLGTA
RDGQVIDAVSGEYKENFLFHYNFPPYSVGECGRFGAPKRREIGHGRLAKRGVLAVMPSLE
EFPYTIRVVSEITESNGSSSMASVCGSSLALMDAGVPVKAPVAGIAMGLVKEDDRFVVLS
DILGDEDHLGDMDFKVAGTAEGVSALQMDIKIEGITEEIMKQALQQAKAGRLYILGEMSK
ALTTPRLELSDYAPRLLTIKIHPDKIREVIGKGGSTIQAITKETGTQIDIQDDGTIIIAS
VNAIAAQAAKSRIEQITSDVEPGRIYEGKVAKIMDFGAFVTILPGKDGLVHVSQISSERV
EKVGDKLKEGDLVRVKVLEVDKQGRIRLSIKAVEEGEGVPASAE
NT seq 2115 nt   +upstreamnt  +downstreamnt
gtggcaaaaatcaccaaaaccttccagtacggcaagcacaccgtcaccctggagacgggc
gaaatcgctcgccaggcaggcggcgccgtcatcgtcaagttcgacgacaccgtactgctg
gtcaccgccgtcgccgcgaagagtgcgcgcgaagggcaggacttcttccccctgacggtt
gattatcaggagaagttctatgccggcggccgcatcccgggcggcttcttcaagcgcgaa
ggacgtgcgaccgagaaggaaacgctgatctcgcgcctgatcgaccgtccgatccgtccg
ctgttcccggaggactacaagaacgaagtacagatcatcgccacggtgatgtcgatgaac
ccggacatcgacggcgatatcgccgcgctgatcggcgcatcggccgcactgtcgctggcc
ggtacccccttcaacggcccgatcggcgccgccaaggtgggctacaagaacggtgagtac
atcctcaacccgaccatctccgagctgaaggattcgcagctggagctggtggttgccggt
accgccaatgcggtgctgatggtggagtcggaagcggcgctgctgtccgaagaagtgatg
ctgggcgcggtcaccttcggccatcgcgagttgcagaaggtcatcaacgtcatcaacgag
ctgaccgtcgaagccggcaccaagcccagcacctgggttgcgcctgccaagaacaccgcg
ctgatcaatgcactgaaggaagcggtcggcgcgcagctgtccggtgccttccaggtgcgc
gacaagctgcagcgtcgcgacgcgatctccgcgatcaagaaggacgtgctcgagtcgctg
gcgggccgggttgcttcggaaggttggagcagtgccgagctgtcgaaggaattcggcgag
ctggaataccacaccatgcgcgactcggtcctggagaccaaggtgcgtatcgacggccgt
gcactggataccgtgcgtccgatctcggtgcaggccggcatcctgccgcgtacgcatggc
tcggcgctgttcacccgcggcgagacgcaggcgatcgtggtcaccacgctgggcaccgcc
cgcgacggccaggtgatcgatgcggtcagcggcgagtacaaggaaaacttcctgttccat
tacaacttccctccgtactcggtgggcgagtgtggtcgtttcggtgcgcccaagcgtcgc
gaaatcggtcacggccgtctggccaagcgcggcgtgctcgcggtgatgccgagcctggaa
gaattcccgtacaccatccgcgtcgtctcggaaatcaccgagtccaacggctcttcgtcg
atggcttcggtgtgcggcagctcgctggcgctgatggatgccggcgtgccggtcaaggca
ccggtggcgggtatcgccatgggcctggtgaaggaagacgaccgcttcgtggtgctgtcc
gacatcctgggtgacgaagatcacctgggcgacatggacttcaaggtggccggtactgcc
gaaggcgtgtccgcgctgcagatggacatcaagatcgaaggcatcaccgaagagatcatg
aagcaggcattgcagcaggccaaggctggccgtctgtatatcctgggcgagatgtccaag
gcgctgaccaccccgcgtctggagctgagcgactacgcgccgcgtctgctgaccatcaag
atccacccggacaagatccgcgaagtgatcggcaagggtggctcgaccatccaggcgatc
accaaggaaaccggtacgcagatcgacatccaggacgatggcacgatcatcatcgcctcg
gtgaatgcgattgccgcgcaagctgcgaagtcgcgcatcgagcagatcacctcggacgtg
gagccgggccgcatctacgaaggcaaggtcgccaagatcatggacttcggtgcgttcgtc
accatcctgccgggcaaggacggcctggtgcacgtctcgcagatttccagcgagcgcgtg
gagaaggtcggcgacaagctgaaggaaggcgatctggttcgcgtcaaggtgctggaagtg
gacaagcagggccgcatccgtttgtcgatcaaggcagtggaagaaggcgagggcgtgccg
gcttcggccgagtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (9)   
   Pfam (9)   
All databases (19)   

Download RDF
DBGET integrated database retrieval system