KEGG   Xanthomonas hortorum: XJ27_15350
Entry
XJ27_15350        CDS       T05082                                 
Name
(GenBank) exodeoxyribonuclease V subunit beta
  KO
K03582  exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
Organism
xhr  Xanthomonas hortorum
Pathway
xhr03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:xhr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    XJ27_15350
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xhr03400]
    XJ27_15350
Enzymes [BR:xhr01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     XJ27_15350
DNA repair and recombination proteins [BR:xhr03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     XJ27_15350
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 PDDEXK_1 AAA_30 AAA_22
Other DBs
NCBI-ProteinID: ASW47186
Position
complement(3514071..3518144)
AA seq 1357 aa
MSASPVTDPYLHLPLQGVRLIEASAGTGKTFTLATLFTRLVVERGLRIGQILAVTFTEAA
TQELRRRIRERLVLAATLVPDAPVGAAPAATDLADDPSRPGPLLHEAPDAFLATHLAPGT
ETLTAPVGAAPAATGLANDPSWPGPLLQEAPDVLLTRAVLATHLATGTETPAALRRRLQQ
AVEEIDLAAVFTIHGFCARVLREHALESGQAFAAPELLANDRELLGEVAADLWRQRAADA
AMAEDLIALWSGGPDALASDLRALVRHPTLLPAVATTTDDAAALLQAVQDASTALAAAFQ
SHGTAFFEAIMSAIDGGILSKVSYKPEWLASLWHWFDSFAAAPSTHTAPHPKLIKLTAAE
LAAGTNKKFVERTPASPLSHEIDGYLTALARVEEWRTRRRIRLLHALRDDAIARLALLKR
QRRVQTYDDLVDGVAHALEGAQAEALVTRLRAQYAIALVDEFQDTDDRQWAIFSNVFGEG
PLARAAGLEPALFLIGDPKQAIYGFRGGDVRTYLAAAVTAELAPPLSHNFRSRPGVLAAI
DALYAQAGYSEAFLTDGIAFHPVRPGTKRVDADLQRDGGPAPALTLWRAPEPPLPSKGKP
KPWSAGRARELATAACVAAIRGWLAGGRDGTATVNGRPVQAGDIAVLVRSHGEATRMQQA
LGAVGVPAVAAGKQSLFATDEALELLALLQALLDPGDDSRLRAALATVLIGADAAAIAAL
AHDGERHRRWQQQALDWRERWQRGGPLALIGDLGAAHGQRLLALVDGERRLTNYLQLAEL
LQEADARALGPHGLVDWLSRRIANADDNDEAQQLRLESDARRVQIVTLHKSKGLEYPLVF
LPYIGIGRSDKGAGRHCVVHAPELGRQLHWNVSKWSRDKDDPTWSAAEAAWKQEQRAEDA
RLLYVGLTRAEHALWIASGPFHQHERTALSGMLRALDTLQGAAGEGAVVVDTSTPPATLP
RLPPPIEAQVPPARTPQRHIAPEWWVYSFTQLANADAGAATDPMASATVVGSGGSDEPSG
SEAIAVAAEVDTFDPRFAGNRFGVVMHDVFERCDFAAWHAWHPGQPAPEGQAAAILEALQ
RGGYTQDELDDGLAMLTALIGHTLTVVLPEGTTLAAVPEPQRRNEMEFHFAMRPTRVEAL
LALLHRFGVVSDRQAFGARQRLEGLMTGLIDLTYTVDGRWYVLDYKSNRLPSYDADALAR
AMAHSEYELQALIYTVALHRWLRFRLGDAYDYARDFGGVRYLFCRGLDATRNPAADSSSI
LGSGFDSNSNSNSDSVNGASSVSGSDPASDAMSDTPAPNTPVPGIHAWRFDPALVQALDA
LFAGNPTEPLSSDALKPLSPRERGWGEGTSTMGTPTP
NT seq 4074 nt   +upstreamnt  +downstreamnt
atgagcgccagccccgttaccgacccgtatctgcatttgccgttgcaaggcgtacgcctg
atcgaggccagcgccggcaccggcaagaccttcaccctggccaccctgttcacccggctg
gtggtcgagcgcgggctgcgcatcggtcagatcctcgcggtcaccttcaccgaagccgcc
acccaggaactgcgccgccgcatccgcgagcgcctggtgctggcagcaaccctggtcccc
gacgcccccgtaggagcggccccggccgcgaccgacctcgccgatgacccgtcgcggcca
gggccgctcctacacgaagcgcccgacgcctttctcgccacgcacctggcccctggcacc
gaaacactcaccgcccccgtaggagcggccccggccgcgaccggcctcgccaacgacccg
tcgtggccagggccgctcctgcaggaagcgcccgacgtcctgcttacgcgcgccgtcctc
gccacccacctggccaccggtaccgaaacacccgccgccttacgccgccgcctgcagcag
gcggtggaagaaatcgacctggccgccgtcttcaccatccacggtttctgcgcacgtgtg
ctgcgcgaacatgcgctggaaagcggccaggccttcgccgcgccggaactgctcgccaac
gaccgcgaactgctgggcgaagtcgccgcagatctgtggcgccagcgcgccgccgatgcg
gcgatggccgaagacctgatcgcgctgtggtcgggcggcccggatgcattggctagcgat
ctgcgcgcgctggtgcgccatccgacgctgttgccggcggtggccacaaccaccgacgat
gcggccgcgctgctgcaggccgtgcaagacgccagcaccgccttggccgccgcattccag
tcccacggcaccgcgtttttcgaagcgatcatgtccgccatcgacggcggcatcctgagc
aaggtcagctacaagcccgagtggctcgcatcgctgtggcattggttcgacagcttcgcc
gccgcgccatcgacgcacaccgcgccgcaccccaagctgatcaaactcaccgccgcggaa
ctggccgccggcaccaacaagaagttcgtcgagcgcacaccggcctcgccgctgagccac
gagatcgacggctatctcaccgcgctggcccgtgtcgaagaatggcgcacccgtcgccgc
atccgtctgctgcacgcactgcgcgacgatgccatcgcacgattagcattgctcaagcgc
cagcgccgcgtgcagacctacgacgacctggtcgatggcgttgcgcacgcactggaaggc
gcgcaagccgaggccctggtcacacggctgcgcgcgcaatacgccatcgcgctggtggac
gaattccaggacaccgacgaccgccagtgggcgatcttctccaacgtgttcggcgaaggc
ccgctcgcacgcgcggccggcctggagccggcgctgtttttgatcggcgaccccaagcag
gccatctacgggttccgtggcggcgacgtgcgcacctatctggccgccgcagttaccgcc
gaacttgcccccccgctgagccacaacttccgctcgcgcccgggcgtgctggcggccatc
gacgcgctgtacgcgcaggctggctatagcgaggccttcctcaccgacggcatcgccttc
cacccggtgcggcccggcaccaagcgggtggatgccgacctgcaacgcgatggcggcccc
gccccggcgctgacgctgtggcgcgcgccggaaccgccgctgccaagcaaaggcaaaccc
aaaccctggagcgccggccgcgcgcgcgagctggccaccgccgcctgcgtcgcggccatc
cgcggctggctggccggtggccgcgacggcaccgccaccgtcaatggccgcccggtgcag
gccggcgatatcgccgtgctggtgcgcagccacggcgaggccacgcgcatgcaacaggcg
ctgggcgcggtgggagttccggcggtcgcagcaggcaagcagagcctgttcgccaccgac
gaggcgctggaactgctggccctgctgcaggccttgctcgacccgggcgacgacagccgc
ctgcgcgccgccctggctactgtattgatcggcgcagacgccgccgccatcgccgcgctc
gcacacgacggcgagcggcatcgccgctggcagcagcaggcgctggactggcgcgagcgc
tggcaacgcggcggcccgctcgccttgatcggcgaccttggcgctgcgcacgggcaacgc
ctgctcgccctggtcgatggcgagcgccgcctcaccaactacctgcagctggccgaactg
ctgcaggaggccgacgcccgcgcgctcggcccgcacggcctggtcgactggctgtcgcgc
cgcatcgccaatgccgacgacaacgacgaagcccagcagctgcggctggaatcggacgcg
cgccgcgtgcagatcgtcaccctgcacaagagcaagggcctggaatatccgctggtgttc
ctgccgtacatcggcatcggccgcagcgacaagggcgccggccgccattgcgtagtgcat
gcgccggagctcggccgccagctgcactggaacgtgtccaaatggagccgggacaaggac
gaccccacctggagcgccgccgaagctgcctggaagcaggaacaacgcgccgaagacgcc
cgcctgctctacgtcggcctgactcgcgccgagcacgcgctgtggatcgccagcggcccg
ttccatcagcacgagcgcacggctttgtccggcatgctgcgcgcgctcgatacgctgcag
ggcgcggccggcgagggcgcagtggtggtcgacacgtccacgccgcccgccaccctgccg
cgcctgccgccaccgatcgaagcgcaggtgccgcctgcgcgcaccccgcagcggcatatc
gccccggagtggtgggtctacagcttcacccagctggccaacgccgatgccggcgccgcc
accgacccgatggccagcgccaccgtggtgggcagtggcggcagcgacgagccgtccggc
agcgaggcgatcgcggtggccgccgaggtcgacaccttcgacccgcgctttgccggtaac
cgctttggcgtggtgatgcacgacgtgttcgagcgctgcgacttcgccgcctggcatgcc
tggcaccccggccaacccgcacccgagggccaggccgccgccatcctcgaggcgctgcaa
cgcggcggttacacccaggacgaactcgacgacggcctggccatgcttaccgccctgatc
ggccacaccctcaccgtcgtcctgcccgaaggcaccaccctggccgccgtgcccgagccg
cagcgccgcaacgagatggaattccacttcgccatgcggcccacccgcgtggaggcattg
ctcgcattgctgcatcgcttcggcgtggtgagcgaccgccaggccttcggcgcgcgccag
cgcctggaaggcctgatgaccggcctgatcgacctcacctacaccgtggacggccgctgg
tacgtgctcgactacaagtccaaccgcctgcccagctacgacgccgacgccctggcccgc
gccatggcgcacagcgagtacgaattgcaggcgctgatctacaccgtggccctgcaccgc
tggctgcggttccgcctgggcgatgcctacgattacgcccgcgacttcggcggcgtgcgc
tacctgttctgccgcggcctggatgccacccgtaaccccgcagccgactccagctccatc
ctcggttccggtttcgactccaactccaactccaactccgactccgtcaacggcgccagc
tccgtctccggttccgaccccgccagcgacgccatgtccgacacgcctgcacccaatacg
cctgtgcctggcatccacgcctggcgcttcgacccggcgctggtccaagccctggacgcc
ctgttcgccggcaaccccaccgagcctctttccagtgacgccttaaagcccctctcccct
cgggagaggggttggggtgagggtacgtccaccatgggaacgcccaccccatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (16)   

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