KEGG   Xanthomonas hyacinthi: FZ025_00070
Entry
FZ025_00070       CDS       T06345                                 
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
  KO
K00970  poly(A) polymerase [EC:2.7.7.19]
Organism
xhy  Xanthomonas hyacinthi
Pathway
xhy03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:xhy00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    FZ025_00070 (pcnB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xhy03019]
    FZ025_00070 (pcnB)
Enzymes [BR:xhy01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     FZ025_00070 (pcnB)
Messenger RNA biogenesis [BR:xhy03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     FZ025_00070 (pcnB)
SSDB
Motif
Pfam: PolyA_pol PolyA_pol_arg_C PolyA_pol_RNAbd DUF3136 DUF6448
Other DBs
NCBI-ProteinID: QGY75147
Position
complement(14657..16021)
AA seq 454 aa
MINPPAPSPFTLQLIPRDQHNVSRKDISPNALRVLYRLREAGFGAYLVGGAVRDLLVELQ
PKDFDVATDATPEQVKQLFRNCRLIGRRFRLAHVVYGREIIEVATFRANVDDGSGDRELD
NGRLVRDNVYGSIEDDAVRRDFTCNALYYAIEDFSVRDYTGGFADVQARRMRMIGDPEQR
YREDPVRMLRAVRLAAKLDFEIESATAEPLPRLAGLLAEAAPARLFEEVLKLFLSGDGVA
SFEGLERYGLLAALFPESAAALNSNRSGALRRMLIEGLRNTDARVANDEPVSPAFLFALL
LWPAYCRALMALQKQGMQLEEAQRRAADRVTLHQLSTVALPRRFSLPMQEIWLLQSRFTS
RQKKRVVRTLSHPRFRAAFDFLILRQSASAEHEADIAYWRELQQQPGYAPPPRGFDPEID
YVGDEVAMAPADSEETPKRRRRRRRRPDAAAPAE
NT seq 1365 nt   +upstreamnt  +downstreamnt
atcatcaacccgccagctccatcgccgttcactctgcagctgatcccgcgcgatcagcac
aacgtctcgcgcaaggacatcagtcccaatgcgttgcgcgtgctgtaccggctgcgcgaa
gccggcttcggcgcgtacctggtcggcggcgcggtccgtgacctgctggtcgaactgcag
cccaaggacttcgacgtcgccaccgacgccacccccgagcaggtcaagcagctattccgc
aactgccgcctgatcggccgccgcttccgcctggcgcacgtggtctacggccgcgagatc
atcgaggtggccacgttccgcgccaacgtcgacgacggcagcggcgaccgcgaactcgac
aacggccgcctggtccgcgacaacgtctacggcagcatcgaggacgacgcggtgcgccgc
gacttcacctgcaacgcgctgtactacgcgatcgaggatttctcggtgcgcgactacacc
ggcggcttcgccgacgtgcaggcgcggcggatgcgcatgatcggcgaccccgagcagcgt
tatcgcgaagacccggtgcgcatgctgcgcgcggtgcgcctggcggccaagctggatttc
gagatcgagtcggccaccgccgagccgctcccgcgcctggcagggctgctggccgaagcg
gcgccggcacggctgttcgaggaagtgctgaagctgttcctgtccggcgacggcgtggcc
agcttcgaaggcctggagcgttacggcctgctcgccgcgttgttcccggagagcgcggcg
gcgctcaattccaaccgcagcggggcgctgcggcggatgctgatcgagggcctgcgcaac
accgatgcgcgcgtggccaacgacgagccggtgtcgccggcgttcctgttcgcgctgctg
ctgtggccggcctactgccgtgcgctgatggcgctgcagaagcagggcatgcagttggaa
gaagcgcagcgccgcgccgccgaccgggtgaccctgcaccagctgagcacggtcgcgttg
ccgcggcgcttctcgctgccgatgcaggaaatctggctgctgcagtcgcgcttcacctcg
cgccagaagaagcgggtggtgcgcacgctgtcgcacccgcgcttccgcgccgcgttcgat
ttcctgatcctgcgccagtcggcctcggccgagcacgaagccgacatcgcctattggcgc
gaactgcagcagcagccaggctacgcgccgccgccgcgcggcttcgatccggagatcgac
tacgtcggcgacgaggtggcgatggccccggccgacagcgaggaaacccccaagcgccgc
cggcgccggcgccggcgtccggatgccgccgcaccggccgagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (5)   
   Pfam (5)   
All databases (13)   

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