KEGG   Xanthomonas hyacinthi: FZ025_07280
Entry
FZ025_07280       CDS       T06345                                 
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
  KO
K03582  exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
Organism
xhy  Xanthomonas hyacinthi
Pathway
xhy03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:xhy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    FZ025_07280 (recB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xhy03400]
    FZ025_07280 (recB)
Enzymes [BR:xhy01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     FZ025_07280 (recB)
DNA repair and recombination proteins [BR:xhy03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     FZ025_07280 (recB)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 PDDEXK_1 AAA_30 AAA_22
Other DBs
NCBI-ProteinID: QGY76480
Position
complement(1603572..1607384)
AA seq 1270 aa
MSATLGDDPYLSLPLHGVRLIEASAGTGKTFTLATLFTRLVVERGLRIGQILAVTFTEAA
TQELRRRIRERLALAATLVPEAAFPVDGIPLVGGASAPTGLTEDASTAKFLTDTPDATLT
RTILATHLATAQETPAALRRRLQQAVEEIDLAAIFTIHGFCARVLREHALESGQTFAAPE
LLANDRDLLGEVAADLWRQRAADAAMADDLVALWPGGPDALASDLRQLVRHPQLLPAAPA
LADDVAAATQQVQDAAAALATAFHAHGTVFFEAIAAAIEDGVLSKVSYKPEWLASLWHWC
EGFAVAPAAGLPPHAKLIKLSAAELASGTNKKCVGRTPASPMSHEVVGYLAALARLEEAR
ARRRIRLLHALRGDAVVRLALLKRQRRVQTYDDLVDGVAHALRPDGPQAEALARRLRAQY
AIALVDEFQDTDDRQWSIFSNVFGEGALAREAGLEPALFVIGDPKQAIYGFRGGDVQTYL
AAAADAEPAPPLGHNFRSRPALLAAIDALYAQAGYAQAFLTDGIAFHPVQPGSKRRDAEL
QRDGATAPALTLWRAPEPPPPPAASAAKNKSAGKPKPWSAGRARALCTAACVAAIRDWLA
DARAGTASVAGRTVQAGDIAVLVRSHGEAIRIQQALGAVGIPAVAAGKQSLFATDEALEL
LTLLQALLDPGDDSRLRAALATLLIGEDAAAIAALEHNGDQHRSWQQQALDWRERWQRGG
PLALIGDLGAAHAQRLLALVDGERRLTNYLQLAETLQEADTRALGTHGLVDWLARRIANA
DDNDETQQLRLESDARRVQIVTLHKSKGLEYPLVFLPYVGIGRSDRGAGRHCVVHAPPLG
RQLHWNTGKDDPAWSAAEAAWKQEQRAEDARLLYVGLTRAEHALWIATGPFHQHERTALA
AMVGDPDALQAAAGEGAIAIDTTPPPASLPRLPPAADVQVPPARIPQRHVVADWWVYSFT
QLANADAGAAADPMASATVVGSGGSDEPSTSEAVATTLDVEAFDRRFTGNRFGVAMHDVF
ERCDFAAWRDWVPGQPAPDGQTAALIEALQRGGYAQDELEDGAAMLTALVGHTLTVALPE
GTRLAAVPAAQRRNEMEFHFAMRPTRVDALLALLHRFGVVGERQAFGARQRLEGLMTGLI
DLTYQHDGRWYVLDYKSNRLPSYDADALVRAMAHSEYALQALIYTVALHRWLRFRLGETY
DYARDFGGVRYLFCRGLDATRDPSPGVHAWRFDPDLVESVDALFAGALTPLSPRERGWGE
GTPAHGASTS
NT seq 3813 nt   +upstreamnt  +downstreamnt
atgagcgcgacgctcggcgacgacccgtacctgagcctgccgctgcacggcgtgcgcctg
atcgaggccagcgccggcaccggcaagaccttcaccctggccacgctgttcacccggctg
gtggtcgagcgcggcctgcgcatcggccagatcctggcggtcaccttcaccgaagccgcc
acccaggaactgcgccggcgcatccgcgagcgcctggcgctggccgcgacgctggtgccc
gaggcagcattccctgtcgatgggattccccttgtgggaggggcttcagccccgacgggc
cttaccgaggacgcctcgacagcgaagttcctcacggacactcccgacgccaccctcacc
cgcaccatcctcgccacccatctggccaccgcgcaggaaacccccgccgccctgcgccgc
cgcctgcagcaggccgtggaggaaatcgacctcgccgccatcttcaccatccatggcttc
tgcgcgcgggtgctgcgcgagcacgcgctggagagcggccagaccttcgccgcgccggag
ctgctggccaacgaccgcgacctgctcggcgaagtcgccgccgacctgtggcgccagcgc
gccgccgacgcggcgatggccgacgacctggtcgcgctatggccgggtggacccgacgcg
ctggccagcgacctgcgccagctggtgcggcatccgcaactgctgccggcggcaccggcg
ctggccgacgatgtcgccgcggccacgcagcaggtgcaggacgcggccgccgcgctcgcc
accgcgttccacgcgcacggcaccgtttttttcgaagcgatcgccgccgccatcgaagac
ggcgtgctgagcaaggtcagctacaagccggaatggctggcatcgctgtggcattggtgc
gaaggcttcgccgtcgcgcctgcggccggcctcccgccgcatgccaagctgatcaagctc
agcgctgcggaactggcgtccggcaccaacaagaaatgcgtcgggcgcacgccggcctcg
ccgatgagtcatgaagtcgtcggctatctggccgcgctggcgcggttggaggaagcgcgc
gccaggcgccgcatccgcctgctgcacgcgctgcgcggcgacgcggtcgtgcggctggcc
ttgctcaagcgccagcgccgcgtgcagacctacgacgacctggtcgatggcgtcgcgcac
gcgttgcggcccgacggtccgcaggccgaagcgctggcgcggcggctgcgcgcgcaatac
gccatcgccctggtggacgaattccaggacaccgacgaccgccagtggtcgatcttctcc
aacgtgttcggcgaaggcgcgctggcgcgcgaggcgggactggagccggcactgttcgtg
atcggcgatcccaagcaggcgatctacggcttccgcggcggcgacgtgcagacctacctg
gccgcggccgccgatgccgaaccggcgccgccgctcggccacaacttccgctcgcgcccc
gcgctgctggcggcgatcgacgcgctgtacgcgcaggccggttatgcgcaggcgttcctg
accgacggcatcgccttccatccggtgcagccgggcagcaagcgtcgcgatgccgagctg
cagcgcgatggcgccaccgcgccagcgctgaccctgtggcgcgcgccggagccgccgccg
ccgccggccgcgtctgcggccaaaaacaagtccgcaggcaagcccaaaccctggagcgcc
ggccgcgcgcgcgcgctgtgcaccgccgcctgcgtcgccgcgatccgcgactggctggcg
gatgcccgcgccggcaccgccagcgtcgccgggcgcacggtgcaggccggcgacatcgcg
gtgctggtgcgcagccacggcgaggccatccgcatccagcaggcgctgggcgcggtcggc
attcccgcggtggccgccggcaagcagagcctgttcgccaccgacgaagcgctggaactg
ctgaccctgctgcaggcgctgctcgacccgggcgacgacagccgcctgcgcgcggcgctg
gcgacgctgctgatcggcgaggacgccgccgcgatcgccgcgctcgaacacaacggcgat
cagcaccgcagttggcagcaacaggcgctggactggcgcgagcgctggcagcgcggcggc
ccgctggcgctgatcggcgacctcggcgccgcgcatgcgcaacgcctgctggcattggtc
gatggcgagcgccgcctgaccaactatctgcagttggccgaaacgctgcaggaggccgac
acccgcgcgctcgggacgcacggcctggtcgactggctggcgcggcgcatcgccaatgcc
gacgacaacgacgagacccagcaactgcgcctggaatcggatgcgcggcgggtgcagatc
gtgaccctgcacaagagcaagggcctggagtatccgctggtgttcctgccttacgtcggc
atcggccgcagcgaccgcggcgccggccgccactgcgtcgtgcacgcgccgccgctcggc
cgccaactgcactggaacacaggcaaggacgacccggcctggagcgccgccgaggcggca
tggaaacaggaacagcgcgccgaggacgcacgcctgctctacgtcggcctgacccgcgcc
gagcacgcactgtggatcgccaccggtcccttccaccagcacgaacgcaccgcgctggcg
gcgatggtcggcgacccggatgcattgcaggcggccgcaggcgagggcgcgatcgccatc
gacaccaccccgccgccggccagtctgccgcgcctgccgcctgccgccgacgtgcaggtg
ccgccggcgcgcatcccgcagcgccacgtcgtggcggactggtgggtgtacagcttcacc
cagctggccaacgccgatgccggcgccgccgccgacccgatggccagcgccaccgtggtc
ggcagcggcggcagcgacgagccgtccaccagcgaggccgtcgcgacgacgctggacgtg
gaagcgttcgaccgccgcttcaccggcaaccgcttcggcgtggccatgcacgacgtgttc
gaacgctgcgacttcgccgcctggcgcgactgggtccccggccaaccggcaccggacggg
cagaccgcggcgctgatcgaagccctgcagcgcggcggctacgcccaggacgaactggag
gatggcgccgccatgctcaccgccctggtcggccacaccctcaccgtcgcgctgccggaa
ggcacccgcctggccgcggtgcccgcagcgcagcgccgcaacgaaatggagttccacttc
gccatgcggcccacccgcgtcgatgcgctgctggccctgctgcaccgcttcggcgtggtc
ggcgagcgccaggccttcggtgcgcgccagcgcctggaaggcctgatgaccggcctgatc
gacctcacctaccagcacgacgggcgctggtacgtgctcgactacaaatccaaccgcctg
cccagctacgacgccgacgcgttagtgcgggcgatggcgcacagcgaatacgcactgcag
gcgctgatctacaccgtcgcgctgcaccgctggctgcgtttccgcctgggcgaaacgtac
gactacgcccgcgacttcggcggcgtgcgctacctgttctgccgcggcctcgacgccacc
cgcgacccctcgccaggcgtccacgcctggcgcttcgaccccgatctggtcgagtccgtc
gacgccctgttcgccggcgccctaacgcccctctccccccgggaaaggggttggggtgag
ggtacgccggcacatggagcgtccacctcatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (7)   
   Pfam (7)   
All databases (15)   

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