KEGG   Xanthomonas hyacinthi: FZ025_07385
Entry
FZ025_07385       CDS       T06345                                 
Symbol
fis
Name
(GenBank) DNA-binding transcriptional regulator Fis
  KO
K03557  Fis family transcriptional regulator, factor for inversion stimulation protein
Organism
xhy  Xanthomonas hyacinthi
Brite
KEGG Orthology (KO) [BR:xhy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:xhy03000]
    FZ025_07385 (fis)
   03036 Chromosome and associated proteins [BR:xhy03036]
    FZ025_07385 (fis)
   03400 DNA repair and recombination proteins [BR:xhy03400]
    FZ025_07385 (fis)
Transcription factors [BR:xhy03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    FZ025_07385 (fis)
Chromosome and associated proteins [BR:xhy03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    FZ025_07385 (fis)
DNA repair and recombination proteins [BR:xhy03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Facilitator
      FZ025_07385 (fis)
SSDB
Motif
Pfam: HTH_8 HTH_30 Phage_NinH BrkDBD HTH_28 HTH_29 HTH_23 Xre-like-HTH ZNHIT3_C UPF0175 HTH_17
Other DBs
NCBI-ProteinID: QGY76498
Position
1629212..1629484
AA seq 90 aa
MNAATTRPDSSRGAPKPPLREHVAQSVRRYLRDLDGCDADDVYEIVLREMEIPLFVEVLN
HCEGNQSRAAAMLGIHRATLRKKLKEYGLA
NT seq 273 nt   +upstreamnt  +downstreamnt
ttgaacgctgccaccactcgtcctgactccagtcgcggcgcgccgaagccgccgctgcgc
gaacacgtggcccagtccgtgcgccgctacctgcgcgacctcgatggctgcgatgccgac
gacgtatacgagatcgtgctgcgcgagatggagatcccgctgttcgtggaagtgctcaac
cactgcgaaggcaaccagagccgcgccgcggcgatgctcggcatccatcgcgccacgctg
cgcaagaagctgaaggaatacggattggcgtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (11)   
   Pfam (11)   
All databases (18)   

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