KEGG   Xanthomonas hyacinthi: FZ025_20885
Entry
FZ025_20885       CDS       T06345                                 
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
  KO
K01975  RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
Organism
xhy  Xanthomonas hyacinthi
Brite
KEGG Orthology (KO) [BR:xhy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:xhy03016]
    FZ025_20885
Enzymes [BR:xhy01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.58  RNA 2',3'-cyclic 3'-phosphodiesterase
     FZ025_20885
Transfer RNA biogenesis [BR:xhy03016]
 Prokaryotic type
  tRNA spricing factors
   Other tRNA splicing factors
    FZ025_20885
SSDB
Motif
Pfam: 2_5_RNA_ligase2 LigT_PEase
Other DBs
NCBI-ProteinID: QGY78951
Position
complement(4735727..4736368)
AA seq 213 aa
MAHDVSSADAQFSLDFAAPAPRERLFFAVLPDAATAQRVFAVGERLRAAHGLRGRALPVE
RLHLTLHYLGEYAGIPPRLLQQAHAAGQALAAAPFDLCFDRVASFGGRACTRPLVLLGDG
EPAALRRLRAALQQQLGRQGVATRADAAYVPHLTLAYDDRAVPLQAVPELRWTVATLSLI
RSVQGQGRYLHEATWLLSAETAERARAGDAVRR
NT seq 642 nt   +upstreamnt  +downstreamnt
atggcccacgatgtttcctctgcagacgcgcagttctcgctcgatttcgccgcgccggcg
ccgcgcgagcgcctgttcttcgccgtgctgccggatgcggcgaccgcgcagcgcgtgttc
gccgtgggcgagcgcctgcgcgccgcgcatggcctgcgcgggcgtgcgttgccggtcgag
cgtctgcacctgaccctgcattatctcggcgagtatgccggcatcccgccgcgcctgctg
cagcaggcgcatgccgccggacaggcgctggcggcggcgccattcgacctgtgtttcgat
cgggttgccagcttcggcggccgcgcctgcacgcggccgttggtgttgcttggcgacggc
gagccggccgcgctgcgccgactgcgcgcggcgctgcagcagcaacttggccgccagggc
gtggccacgcgcgccgatgcggcctatgtgccgcacctcaccctggcctacgacgatcga
gccgtgccgctgcaggcggtgccggaactgcgctggacggtcgccacgctgagcctgatc
cgcagcgtgcaggggcaggggcgttatctgcacgaggcgacctggctgctgtctgcggag
acggccgagcgtgcgcgcgccggcgatgcggtgcgccgatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

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