KEGG   Candidatus Xiphinematobacter sp. Idaho Grape: AMD24_00115
Entry
AMD24_00115       CDS       T04108                                 
Name
(GenBank) Farnesyl diphosphate synthase
  KO
K13789  geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
Organism
xii  Candidatus Xiphinematobacter sp. Idaho Grape
Pathway
xii00900  Terpenoid backbone biosynthesis
xii01100  Metabolic pathways
xii01110  Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:xii00001]
 09100 Metabolism
  09109 Metabolism of terpenoids and polyketides
   00900 Terpenoid backbone biosynthesis
    AMD24_00115
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:xii01006]
    AMD24_00115
Enzymes [BR:xii01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.1  dimethylallyltranstransferase
     AMD24_00115
    2.5.1.10  (2E,6E)-farnesyl diphosphate synthase
     AMD24_00115
    2.5.1.29  geranylgeranyl diphosphate synthase
     AMD24_00115
Prenyltransferases [BR:xii01006]
 Terpene biosynthesis
  Prenyl diphosphate synthase
   AMD24_00115
SSDB
Motif
Pfam: polyprenyl_synt
Other DBs
NCBI-ProteinID: ALJ56310
UniProt: A0A0P0G9E7
Position
complement(122197..123078)
AA seq 293 aa
MELTHYLGEKARLIDKTLDNFLPHPSIKPESLHRAMRYSLFAGGKRLRPILCIAACEICG
GKEKDALPVAAALECVHTYSLIHDDLPCLDNDNFRRGCYTAHKVFGEAIALLAGDALLTL
AFEILAQAHPTLRYSPQMFLSELSRAAGSRKLIAGQVADLEGEGQKRGLSELYFIHRCKT
SAMIVVSLRLGAMVANATPSNLASLTTFGENLGLAFQIVDDILDVTQTSGCLGKSAGKDV
AAKKATYPALMGVGASRREAARFTCSARRAIESFGPRAKLLQKLAFFLLERKR
NT seq 882 nt   +upstreamnt  +downstreamnt
atggaattgactcactatcttggcgaaaaggctcgcttgatagataaaacactagacaac
tttctgcctcatccatccatcaagccggagagcttgcatcgcgctatgcgctacagcctt
tttgcaggggggaagcgtctacgtcccattttatgcatagccgcttgtgaaatttgtggt
ggaaaagaaaaagatgcactgccagtagctgccgcccttgagtgtgttcatacctactcg
cttattcatgatgatcttccctgcttagacaatgacaattttcgccgtggttgttacact
gcccacaaggtttttggtgaagctatcgccctcctggccggtgatgcattattgacgctc
gcatttgaaattttagcgcaggcccatcccacactgcgttattctcctcagatgtttctc
tccgagctttctcgtgctgctggcagtcgcaagcttattgctggacaggtagcagatcta
gagggagaggggcaaaagcgtgggctttcggagctttacttcattcatcggtgtaagacc
tccgcaatgattgttgtctctctacgtcttggtgctatggttgctaacgcaacgccatca
aaccttgcttcgctcacaacatttggtgaaaaccttggccttgccttccagattgttgac
gatatcctcgacgtcacgcagactagcggatgtcttggaaagagtgctggcaaggatgtt
gctgctaaaaaggctacctatcctgcactcatgggagttggggcctcaaggcgagaggcc
gcgcgtttcacttgtagcgctcgccgcgccattgaatctttcgggcctagggccaagctt
ctccagaagcttgcgttctttttgctcgagcgtaagcgctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (3)   
   KEGG MODULE (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (6)   
   KEGG ENZYME (3)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (40)   
   KEGG ORTHOLOGY (1)   
   RefGene (37)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (62)   

Download RDF
DBGET integrated database retrieval system