KEGG   Candidatus Xiphinematobacter sp. Idaho Grape: AMD24_00321
Entry
AMD24_00321       CDS       T04108                                 
Symbol
sucD
Name
(GenBank) Succinyl-CoA ligase [ADP-forming] subunit alpha
  KO
K01902  succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
Organism
xii  Candidatus Xiphinematobacter sp. Idaho Grape
Pathway
xii00020  Citrate cycle (TCA cycle)
xii00640  Propanoate metabolism
xii00660  C5-Branched dibasic acid metabolism
xii01100  Metabolic pathways
xii01110  Biosynthesis of secondary metabolites
xii01120  Microbial metabolism in diverse environments
xii01200  Carbon metabolism
Module
xii_M00009  Citrate cycle (TCA cycle, Krebs cycle)
xii_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:xii00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    AMD24_00321 (sucD)
   00640 Propanoate metabolism
    AMD24_00321 (sucD)
   00660 C5-Branched dibasic acid metabolism
    AMD24_00321 (sucD)
Enzymes [BR:xii01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.5  succinate---CoA ligase (ADP-forming)
     AMD24_00321 (sucD)
SSDB
Motif
Pfam: CoA_binding Ligase_CoA Succ_CoA_lig CoA_binding_2 Ribul_P_3_epim
Other DBs
NCBI-ProteinID: ALJ56503
UniProt: A0A0P0FYU9
Position
complement(335989..336870)
AA seq 293 aa
MAILINKNTRLLVQGITGKSGSFHARGCMEYGTNVVAGVTPGHGGETFDSKVPIFDTVEE
ARKNTGCDATMIFVPGPFAADAVLEAAASGVRLIVCITEGIPVMDMVRVMAILKDKECRL
VGPNCPGIITPGQCKIGIMPGYIHKPGSIGIISRSGTLTYEAVWQLTGRGYGQSTCIGIG
GDPIQGTSHLEALKMLHDDPETQGIVLVGEIGGTAEEEAATWAKEHGEKPLAAFVSGATA
PAGRRMGHAGAIISRGRGTAQSKIEALEQAGFHIARSPADIAEALIQALKANK
NT seq 882 nt   +upstreamnt  +downstreamnt
gtggcaatcttgattaacaagaatactcgcctgctggtgcaggggatcacagggaagtct
ggttcctttcacgcgcgtggttgcatggaatatggaaccaatgtcgtggctggggtgact
ccagggcatggaggagaaacttttgattctaaagtgccgatatttgatactgtagaggag
gcgcggaagaatactggatgtgacgccacaatgatctttgtaccgggcccatttgctgct
gatgcagtgctggaggcggctgcatcaggcgtgaggcttattgtctgtattactgaaggt
attcctgttatggatatggtacgagtaatggcaatattgaaggataaagagtgtcggtta
gtcgggcctaactgcccaggcattataacgcctgggcagtgtaagatcggcattatgcct
ggctatatccacaaaccaggctccattggaattatctctcgctccgggactcttacttac
gaggctgtctggcaattaacaggacgtggctatggacagagcacgtgtattggcatcggg
ggcgatcctatccaggggacttcacacctagaggctctcaagatgctgcacgatgaccca
gagacacaaggaattgttctcgttggagaaattgggggtacagcagaggaggaagccgct
acttgggcaaaagaacatggtgaaaaacctctcgctgcctttgtttccggtgcaaccgca
ccagctgggcgacgcatgggacatgccggagccattatttccagaggaagggggactgca
cagagtaagatagaggccctagaacaggctggtttccacatagctagatcacctgcggat
attgcagaagctctgattcaggccttaaaagctaataagtag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (12)   
   KEGG PATHWAY (7)   
   KEGG MODULE (5)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (44)   

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