KEGG   Xenopus laevis (African clawed frog): 100037019
Entry
100037019         CDS       T01010                                 
Symbol
rnf38.L
Name
(RefSeq) E3 ubiquitin-protein ligase RNF38 isoform X5
  KO
K19041  E3 ubiquitin-protein ligase RNF38/44 [EC:2.3.2.27]
Organism
xla  Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:xla00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:xla04121]
    100037019 (rnf38.L)
Enzymes [BR:xla01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     100037019 (rnf38.L)
Ubiquitin system [BR:xla04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    100037019 (rnf38.L)
SSDB
Motif
Pfam: zf-RING_2 zf-RING_11 zf-rbx1 zf-C3HC4_2 zf-C3HC4 zf-RING_5 zf-C3HC4_3 zf-ANAPC11 zf-RING_UBOX zf-RING_16 zf-C3H2C3 zf-RING-like
Other DBs
NCBI-GeneID: 100037019
NCBI-ProteinID: XP_018112034
Xenbase: XB-GENE-1015613
UniProt: A0A8J0UXU6
Position
1L:119434171..119582649
AA seq 464 aa
MYCNEDSPSPKRQRLSNSVFEYAAASPTPSPPMRPWEMTSNRRPPSARPNQHHFSGERCN
TPARNRRSPPVRRQRGRRDRLARHNSISQDENYHHLSYGQQQAVEEPRAFHPPNVSPRML
HPAAHPPQQNAVMVDIHEQIHQGTVPVSYTVTTVAPHGIPLCTGQHIPACSTQQVPGCSV
VFSGQHLPVCSVPPPMIQACSVQHLPVPYAAFPPLISSDPFLLHPPHLSPHHHAHLPPPG
QFVPFQTQQSRSPLQRIENEVELLGEHLPVGGFTYPPSAHAATLQPSAPLQFITHDPLHQ
EVSFGVPYPQFMPRRITGRNRYRSQQPMPPPPYHPSLLPYVLSMLPVPPTVGPAFSFELD
VEDGEVENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNPNNHQSEQTLCVVCMCDFE
SRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASEVHRDSE
NT seq 1395 nt   +upstreamnt  +downstreamnt
atgtactgtaacgaagacagtcccagccccaagcgacagcggctatctaattcagttttt
gaatacgctgcagcatcgcctaccccatctcccccaatgcgaccatgggagatgacatca
aataggcggcctccttcggctcggcctaaccagcaccacttctcaggggaaagatgcaac
actcccgcacggaacagaagaagcccacctgtgaggcgtcagagagggagaagggacaga
ctggctcgtcacaactccattagccaagatgaaaattatcaccatctctcttatgggcaa
cagcaagcagtagaagagcctcgagccttccacccaccgaatgtatcccctcgcatgctc
catccagctgcacatcctccacagcaaaatgctgtaatggtagacattcatgagcagatt
caccagggcacagtaccggtctcctacacagtcacaacagttgcaccacatgggattcca
ctttgtacaggacagcacatccctgcttgtagtacacagcaagttcctgggtgttcagtg
gtctttagtggccagcacttaccagtctgcagtgtgcctccacctatgattcaggcctgt
tcagttcagcatttaccagtaccctatgctgctttcccacccctcatttcaagtgatccg
tttcttttgcatccaccccacctttccccacatcaccacgctcaccttccgcctcctggt
cagtttgttccctttcagacacagcagtcacgttcgcctctgcaaaggatagagaatgaa
gtggagttgcttggagagcatctacctgtaggtgggtttacgtaccctccatctgcccat
gctgcaacactgcaaccgtctgccccactacagttcataactcatgatcctttgcaccag
gaagtttcatttggtgttccttatccccaatttatgcctcgaagaataactggacgaaac
cgataccgatcacaacaaccaatgccaccaccaccttatcatccaagtcttttaccctat
gtactgtcaatgcttccagtgcctcctaccgttggacctgcctttagctttgagttggat
gttgaagatggggaggtggaaaactatgaggcattgctgaatcttgcagaaagactgggt
gaagccaaaccacggggactaacaaaagcagacattgaacaacttccatcctataggttt
aacccaaacaatcaccagtctgagcagacattatgtgtagtatgcatgtgtgattttgag
tcaagacaacttcttagagtcctgccgtgcaaccatgaatttcatgccaagtgtgtcgac
aaatggcttaaggcaaatcgtacttgtcctatttgtcgggcagatgcttcagaagtgcac
cgtgattccgaatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (7)   
   UniProt (1)   
   RefSeq(pep) (6)   
DNA sequence (10)   
   RefSeq(nuc) (6)   
   GenBank (2)   
   EMBL (2)   
Protein domain (12)   
   Pfam (12)   
All databases (55)   

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