KEGG   Xenopus laevis (African clawed frog): 100125229
Entry
100125229         CDS       T01010                                 
Symbol
colgalt1.L, colgalt1, colgalt1-a, glt25d1, glt25d1-a, glt25d1b
Name
(RefSeq) procollagen galactosyltransferase 1-A precursor
  KO
K11703  collagen beta-1,O-galactosyltransferase [EC:2.4.1.50]
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla00310  Lysine degradation
xla00514  Other types of O-glycan biosynthesis
xla01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:xla00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00310 Lysine degradation
    100125229 (colgalt1.L)
  09107 Glycan biosynthesis and metabolism
   00514 Other types of O-glycan biosynthesis
    100125229 (colgalt1.L)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:xla01003]
    100125229 (colgalt1.L)
Enzymes [BR:xla01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.1  Hexosyltransferases
    2.4.1.50  procollagen galactosyltransferase
     100125229 (colgalt1.L)
Glycosyltransferases [BR:xla01003]
 O-Glycan biosynthesis
  O-linked Gal type
   100125229 (colgalt1.L)
SSDB
Motif
Pfam: Glyco_transf_25 Anp1 Glyco_tranf_2_4
Other DBs
NCBI-GeneID: 100125229
NCBI-ProteinID: NP_001096660
Xenbase: XB-GENE-952958
UniProt: A0JPH3
Position
3L:complement(144824414..144847946)
AA seq 611 aa
MSQAGVDRLLRGLQLLLLVLRLSAGYFPEERWNPESSLRNPTVLIALLARNSEGSLPEVL
GALDTLHYPKERISLWVATDHNLDNTTEILREWLINVQNQYHHVEWRPQEHPRWFKDEEG
PKHWSHSRYEYIMKLRQAALTSAREMWADYIFFLDADNLLTNPETLNLLIAENKTVVAPM
LDSRAAYSNFWCGMTTQGYYRRTPAYMPIRRRERRGCFPVPMVHSTFLIDLRKEASQQLN
FYPPHADYTWAFDDIIVFAFSCRQADVQMFLCNKEIYGHLPVPLRSHGTLLDEADNFVHT
KLEVMVKGPPLNLSSFVTIPEKVPDKMSFDEVFLINLKHRQDRRERMKRTLYELQIDYKL
VDAVYGKTLNQTQVSELGIKMLPDYKDPYHGRPLTRGEMGCFLSHYNIWKEISERNLAVS
AVFEDDLRFEIYFKRRLQTLLHDLETAKLDWDLIYLGRKRMQVDEPEEPVPGVRNLVVSD
YSYWTLGYLISLRGAKKLLNAEPLVKMLPVDEFLPVMYDKHPISDYSSHFSPRDLLAFSV
EPLLLYPTHYTGDEGYISDTETSVLWDNLTEPTDWDRAKSRKTQQQEKLRSEALNSPSLG
SPFDNTARDEL
NT seq 1836 nt   +upstreamnt  +downstreamnt
atgtcccaggccggtgtcgatcggctcctgagggggctccagctattgctgctcgtgttg
cggctcagcgccggctacttcccggaagaacgatggaatccggaatcttcgctccgcaat
ccgaccgtcctgatcgccctgttagcccggaactccgagggttcccttccagaagtgctg
ggagcgctggacacgctgcactacccgaaggagcggatctctttatgggttgccacagat
cataatttggacaacaccaccgagatcttgcgggaatggctgatcaatgtgcagaatcag
tatcatcacgtggagtggagacctcaggagcacccgaggtggttcaaggacgaggaaggc
cccaagcattggtcgcattcccggtacgaatatatcatgaaactacgacaggcggctcta
acctctgcccgagagatgtgggctgattacatttttttcctggatgcagataacttgctg
acaaatcccgagactctgaatcttcttatcgcggagaacaagactgtagtggcccccatg
ctagattccagagctgcgtattctaatttctggtgtggcatgacaacacagggttattac
cggcgcacccccgcatatatgccaatccgccgaagagagcgccggggttgcttccccgtc
cccatggttcactctacgtttctgatagaccttcgtaaggaggcttcccagcagctgaac
ttctacccacctcacgccgactacacgtgggcattcgatgacatcatcgtgtttgcattt
tcctgcaggcaggcagacgtacagatgttcctttgtaataaagagatctatgggcatttg
ccagtccctctccgctctcacgggactctcttggatgaagctgacaactttgttcacacc
aagctggaagttatggtgaagggccccccgctgaatctatcaagctttgtgaccatacct
gagaaagtcccagacaagatgtcttttgatgaggtcttcctcattaacctgaagcatcgg
caggacaggagggaacgcatgaagaggacactgtacgagctccagatagactataagctg
gtagacgccgtgtatggaaagaccctgaatcaaacccaggtctctgaattgggcataaag
atgctccctgactacaaagacccttaccatggccgccctctgactcgcggagagatgggc
tgttttctcagtcactacaacatctggaaggagatctccgagcgcaacttggcggtttca
gcagtgttcgaggatgaccttcgttttgagatctactttaagcggcggctgcagacgctc
ctgcatgatctagagacagccaagctggactgggacctcatttacctgggcaggaagagg
atgcaggttgacgaaccagaagagcctgtgcctggagtccgtaatttggtggtatccgat
tattcctattggaccctggggtatctgatctccttgcgtggggcaaaaaagctgctgaat
gcagaacctcttgtgaagatgctgcctgtagacgagttcttgccagtcatgtatgacaag
caccccatctctgactattcctcccatttctcccctcgagaccttctggctttctcagtg
gagcctctccttctgtatcccacccactacactggagatgagggctacattagtgacacg
gagacctcggtgctgtgggacaatctgacggaacccaccgactgggaccgagcaaagtcg
cgcaagacacaacagcaggagaagctgcgcagcgaggccttaaactccccttccttgggc
tccccttttgacaacactgcccgggatgaattatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (29)   
   KEGG ORTHOLOGY (1)   
   RefGene (24)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (51)   

Download RDF
DBGET integrated database retrieval system