KEGG   Xenopus laevis (African clawed frog): 100381084
Entry
100381084         CDS       T01010                                 
Symbol
ptf1a.L, ptf1a, Ptf1a/p48, XPtf1a
Name
(RefSeq) pancreas transcription factor 1 subunit alpha
  KO
K09073  pancreas-specific transcription factor 1a
Organism
xla  Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:xla00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:xla03000]
    100381084 (ptf1a.L)
Transcription factors [BR:xla03000]
 Eukaryotic type
  Basic helix-loop-helix (bHLH)
   Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors
    100381084 (ptf1a.L)
SSDB
Motif
Pfam: HLH
Other DBs
NCBI-GeneID: 100381084
NCBI-ProteinID: NP_001167491
Xenbase: XB-GENE-484429
UniProt: Q4ZHW1 A0A974CNQ0
Position
6L:complement(25817122..25818731)
AA seq 270 aa
METVLEQLAGLESFPSPYFDEDDFFTDHSSRDALDADDFLEDDVDFLAGQIQDYYRDSRV
LHTDDDYCDAGNFSFSSSSSGGFPYECGDGGCDLSPGMKGGSLVMKRRRRLRSDAEMQQL
RQAANVRERRRMQSINDAFEGLRSHIPTLPYEKRLSKVDTLRLAIGYINFLSEMVQSDLP
LRNPNSDSGNQPKKVIICHRGTRSPSPSDPDYGLPPLAGHSLSWTDEKQLRDQNVVRTAK
VWTPEDPRKLNKSPFSNIENEPPLTLCLDM
NT seq 813 nt   +upstreamnt  +downstreamnt
atggaaacggtcctggagcagttggcggggctcgagtccttcccttccccgtactttgat
gaggacgatttcttcaccgatcattcctctagggacgccctggacgcagacgactttttg
gaagacgatgtagacttcttggccggtcagatccaagactattacagagacagccgagtg
ctacacacagatgacgattactgcgacgccggcaacttctccttctcatcctcctcgtcc
ggcggcttcccctatgaatgcggggacggaggctgcgatttgtcgcccgggatgaaagga
gggagtctggtcatgaagcggaggaggcggctgaggtcggacgcggagatgcagcagctc
aggcaggcggcgaatgtccgggagcggcgcaggatgcagtctattaatgacgccttcgag
gggctccggtcgcacatcccgactctgccctatgagaagcgactgtccaaggtagacacc
ctgcgactggccattggctacattaacttcctcagcgagatggtacagtccgatctgccg
ctcaggaaccccaacagcgactctgggaaccaacccaagaaagtcatcatctgccaccgg
ggcacaagatccccatccccgagtgacccagactacgggctgcctccccttgcgggacat
tctctctcatggactgatgagaagcaactgagagaccaaaacgttgtcagaacggccaaa
gtgtggactcctgaggatcccaggaaattaaacaaatccccattcagcaacatcgaaaac
gaaccccctctgactttgtgccttgatatgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (1)   
   Pfam (1)   
All databases (24)   

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