KEGG   Xenopus laevis (African clawed frog): 108698796
Entry
108698796         CDS       T01010                                 
Name
(RefSeq) ATP-dependent RNA helicase TDRD9 isoform X2
  KO
K18408  ATP-dependent RNA helicase TDRD9 [EC:3.6.4.13]
Organism
xla  Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:xla00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:xla03036]
    108698796
Chromosome and associated proteins [BR:xla03036]
 Eukaryotic type
  Gene silencing
   piRNA pathway
    108698796
SSDB
Motif
Pfam: TUDOR Helicase_C DEAD HA2_C nSTAND3 ResIII FtsK_SpoIIIE HA2_N AAA_14 AAA_19 NACHT T2SSE AAA_23 Viral_helicase1 AAA_22 Helicase_RecD PhoH
Other DBs
NCBI-GeneID: 108698796
NCBI-ProteinID: XP_018086090
UniProt: A0A974H881 A0A8J0TKW9
Position
8L:89841358..89945658
AA seq 1373 aa
MTDHVGDARARFYSRGRGRRRKVAMLRKLSVEQFNDWFTIGKDVTDVKLLGSWSEPGSVA
AGGEEAEESFRRYRGVQSENAYVKEFRLLEERELEKYKSCSANTAHTRKISKIDALTMPE
LDPKYPELPILKSREELITLIENHSVVVIHGATGSGKSTQLPQFILDCLRQHGQYCNIVV
TQPRKIAARSIATWISNQRCWSLGGRVGYQVGLEKVASEETQLIYMTTGVLLQKIVAAKS
LLEFTHIFIDEVHERTEEMDFLLMVVRKLLCTNSRFVKVILMSATINCKEFADYFAVPVL
NKLTPAYIFEVEGKPHDIEVFYLDDLKDIPQAKIADHFFDEPLISKEMYEVATSLIHLFD
EMEKEELKQGRMSRKDYIESNSVLVFLPGLMEINYMHELFTNMVQKRLHVYPLHSSITLD
EQNLVFMPPVIGYRKVILSTNIAESSITVPDVKYVVDFCLTKTLVCDEETHYQSLRLSWA
SKINCDQRKGRAGRVSKGYCYRLVKKEFWKNFIPENVIPEMLRSPLGSTILKVKLLDMGE
PRALLATALSPPNITDIERTILLLKELGALAVSGKREDENPYDGELTFLGKVLAQLPVDL
QLGKLIVLGHVFGCLEECIIIAAALSLKNFFAMPFRQLLDGYKSKLSFSGSSRSDCIALV
DAFKSWQCCKERGELRLSKDELEWGKKYYLQIKRIREVSALCEELKKRIAHFNMHVTQKP
ARDPDYNFKQRFILQVVMAGAFYPNYFTFGQADERTAVRDLAAKDPRTTVVLKNVPNYGF
LYYKEIQSLFRQCGQVKSILFDGSRAFVEFSRKPTERFNTLTAVYLALKMAQLKTPLALN
AHPTEEIEKADETITSLKLSRINVDCQTQTFESIHVSQSMEKALETLNGLILSVTVTEVV
EVGHFWGFRIDAKSMSVLGELGTMISEQQLVPLTARPHSNMMCLAPFKNMDSESYYRAQI
LYISGGTAMVFFVDYGNKSKVEFTVLREIPEKLLELPFQALEFKICKMRPSAKSLICGEQ
WCRSASERFDALVNGCSLMVKVYSIVHGTLHVDVYQHFENLEEKSIRDLLIADGYAEPAE
ESYESNQSNEVLKDLFLATDSGSKKTYKLGFGKGGEKALIEKMIEKCIHNRPRIQQCKTV
LHGPFNPYEVKFHSMMRVSKFRSVWIEKESINSVVLNEAPEAPQQRMFVAATISVNASGS
VIMLRETSLLPPIPGLPALISMLFAPVIELRVDDARKHYTGVLCGLGWHHESGTPIWPEH
DIELAFDVHFSVDDLVKINLLRSTINKVFHQNYTDSLNSSNERPAFFQEDIREKLLNLIQ
KDKPREVITAKWYDKLYQWDQVDPKWLIDQSDRTDEERKADVYQLHTFIMLNP
NT seq 4122 nt   +upstreamnt  +downstreamnt
atgactgatcacgtgggtgatgccagggccaggttttactcgcgcggcagaggcagaaga
aggaaggtggccatgctgcgaaaactttctgtagagcagtttaatgactggtttaccatc
ggcaaggatgtgactgatgtaaaattgctgggttcatggtcggaacctggctcagtggcg
gctggaggcgaagaagcagaggaaagttttaggcggtaccgaggggtgcagtctgaaaat
gcatacgttaaggagttcagactgctggaggagcgagagcttgagaagtacaagagttgt
tctgctaacacagcacatacaagaaaaatctcaaaaattgatgcactaacaatgccggaa
ttggaccctaaatatccagaattgcctatactaaagagcagagaagagttaattacactt
atcgaaaatcattcagttgtggtgatacatggggcaactggcagtggtaaaagtactcaa
ttaccacagttcatcctggattgtctaaggcagcatggacaatactgtaatattgttgtt
actcaacctcgaaaaatagctgcacgaagcattgctacatggataagtaatcaacggtgt
tggagtcttggtggccgagttggatatcaggtgggattggaaaaggtagcatcagaggaa
actcaattaatttatatgacaaccggggtcctcctgcagaagattgttgctgctaagagt
ttgctggaattcacacacatttttatagatgaagttcatgaacgtacagaggaaatggac
ttcttactaatggtggtgcgcaagctcctttgtacaaactcaagatttgtgaaggtgatt
ttaatgtctgccaccatcaactgcaaagaatttgcagattattttgcagtccctgtgtta
aataaactgaccccagcttacatttttgaggtagaaggtaaacctcatgacattgaggtg
ttctatttagatgacttgaaggacattccacaggccaagattgctgatcatttttttgac
gaaccattaataagtaaggagatgtacgaagttgcaacatctttgatacatttatttgat
gaaatggaaaaggaagaattaaagcaaggaagaatgagccgtaaagattatattgagtcc
aacagtgtcttggttttcttgccaggtttgatggagatcaattacatgcatgaacttttc
acaaatatggtacagaaaagattgcatgtgtatcctcttcattcaagcatcactcttgat
gaacaaaaccttgtgtttatgcctcctgttattggatatagaaaggtcattttgtcaaca
aatattgctgagagctctataaccgttccagatgtaaaatacgttgtagatttttgcttg
actaaaacccttgtttgtgatgaagaaacccactatcagagtctgagattgagctgggca
tcaaagataaattgtgatcagaggaaaggaagagctgggcgtgtttccaagggctattgc
tatcgacttgttaagaaagaattttggaaaaactttatacctgaaaatgttatcccagag
atgctgcgtagccctttgggaagcacaatcttaaaggtgaagctcctggacatgggtgag
cctagagcattgctggcaactgcattgtctcctccaaatatcacagatattgaacgaact
atacttttacttaaggagctaggagcacttgcagtgagtggtaaacgagaagatgaaaat
ccatatgatggagagctcactttcttgggaaaagttcttgctcaattacctgtggattta
cagcttggaaaactgattgttcttggccatgtctttggctgcttggaggagtgcattatt
attgctgctgcactttctctaaaaaacttttttgctatgccttttaggcagcttttagat
ggatacaagagcaaacttagtttttctggcagtagcagaagtgactgcattgctcttgtt
gatgcttttaagtcttggcagtgctgcaaggagagaggcgagcttagactttccaaggat
gagctggaatggggcaagaaatattatttacagatcaagagaatcagagaggtgtctgct
ttgtgcgaagaattgaaaaaaagaattgctcactttaatatgcatgttacgcagaagcca
gccagagatccggattacaattttaaacaacggtttattcttcaggttgttatggctggt
gctttttatccaaattatttcacttttgggcaagctgatgaaagaactgctgtacgtgac
ctggctgcaaaagaccccagaaccactgttgtgcttaagaatgtcccaaattatggattt
ttgtactataaggaaatacagtctctcttcagacagtgtgggcaagtgaaatcaatttta
tttgatggctcaagagcatttgttgagttttctcggaagccaactgaaaggtttaacact
cttacagcagtgtacttggcacttaagatggcacagttaaaaacacctcttgcactgaat
gctcatcccactgaagaaatagagaaggctgatgaaaccatcaccagtttgaaactatca
agaataaatgtggactgccaaacacagacatttgaatcaatacatgtgtcccagtcaatg
gaaaaagcattagagacattgaatggccttatattatctgtaactgtcactgaggttgtg
gaagttggccatttttggggattcaggattgatgcgaaaagtatgagcgttttgggagag
ctaggaacaatgatcagtgagcagcagttggtgccccttactgcaagaccacactcaaac
atgatgtgcttagcgccatttaaaaacatggatagtgaaagttattacagagctcagatc
ttgtacatttctggaggtactgctatggttttttttgttgattatggtaacaaatcaaaa
gtggaattcactgtcttaagggagattcctgaaaagcttttagagcttccttttcaggca
ctcgagttcaagatttgcaagatgcgtccttctgcaaagtctttgatttgtggggagcag
tggtgtcgcagtgctagtgagaggtttgatgccttggttaatggatgttcccttatggtg
aaggtttattcaatagttcatggcactcttcacgttgatgtgtatcaacattttgaaaat
cttgaggaaaaaagcataagagatttgcttattgctgacggatatgcagagccagctgaa
gagtcatatgaatccaatcaaagcaatgaagttttgaaggatctcttcctggcaacagat
agtggtagtaaaaagacatacaagctaggttttggaaagggaggtgaaaaggctctgatt
gagaagatgatagaaaaatgcattcataatagacccaggatccaacagtgtaagactgtc
ctacatggtccatttaatccctatgaagtcaaatttcatagcatgatgagagtttccaaa
ttcagatcagtttggatagaaaaagaaagcattaactcagtggtacttaatgaagctcca
gaagcacctcaacagagaatgtttgttgctgcaactatttccgtaaatgcatctggttct
gtgataatgctacgtgagacatctttgctacctcctattcctggattgccagcacttatc
agcatgttgtttgctccagtaattgaattgagagttgatgacgctagaaaacattataca
ggtgtactgtgtggtttgggttggcaccatgaaagtggcactccaatatggcctgaacat
gatattgagctagcttttgatgttcatttctctgtggatgacctggtgaagattaatctt
ctaagatcaacaataaacaaggtcttccatcagaactatactgattctctaaactcctca
aatgagcgacctgcattttttcaagaggatattcgcgaaaagcttctgaatttaattcaa
aaggataaacctcgagaggtgataactgcaaagtggtatgacaaactgtatcaatgggat
caggtagatccaaagtggctcattgaccagtctgacaggacagacgaagaaaggaaagct
gatgtttatcagttgcacaccttcataatgctcaatccttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (39)   
   KEGG ORTHOLOGY (1)   
   RefGene (35)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (17)   
   Pfam (17)   
All databases (66)   

Download RDF
DBGET integrated database retrieval system