KEGG   Xenopus laevis (African clawed frog): 108698871
Entry
108698871         CDS       T01010                                 
Symbol
rabgap1.L
Name
(RefSeq) rab GTPase-activating protein 1
  KO
K20284  Rab GTPase-activating protein 1
Organism
xla  Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:xla00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:xla04131]
    108698871 (rabgap1.L)
Membrane trafficking [BR:xla04131]
 Endosome - Golgi transport
  Rab GTPases and associated proteins
   Rab associated proteins
    108698871 (rabgap1.L)
SSDB
Motif
Pfam: RabGAP-TBC DUF3694 PID UPF0242 PTB
Other DBs
NCBI-GeneID: 108698871
NCBI-ProteinID: XP_041428409
Xenbase: XB-GENE-6488663
UniProt: A0A8J1LH88
Position
8L:15989035..16102730
AA seq 1071 aa
MDDKTSVGKISVSSDSVSTVNSEDFVLVYKQGDEMHSANNGSDDEKTGLKIVGNGSEQQL
QKDLEDVLMDTPAEDQDLHVKEIENAQAEEDPVQPSNEACITSVNTVNSSSVGLQKPDMS
LPVKAAQEECLLSTSMFSSVPDEDSVLFSKLTYLGCASVNAPRSEIEALRMMSILRGQCQ
NALDVTLSVPNFSEGTVRLLDPQTNTEIAMYPIYKILFCVRGHDGTTESDCFAFTESHYN
AELFRIHVFRCEIQEAVSRILYSFATAFRRSAKQTPLSASTPPQMSDSDIFTFSVSLEIK
EDDGKGYFSAVPKEKDRQCFRLRQGVDKKIVIYVQQTSNKELAIERCFGLLLSPGKDVRN
SDMHLLELESMGKSSDGKSYIITGSWNTKSPHFQAVNEETPKDKVLFMTTAVDLVITEVQ
EPVRFLLETKIRVCAVNERLFWPFSKRSSTENFFLKLKQIERKERKNNCDTFYEVICLES
ESERERRKTTASPSIRLLQYGQQGTSIPSPPEDDEEDDNDEPLLSGSGDVSKECAEKILE
TWGDLLSKWHLNLSVRPKQLSGLVRSGVPEALRGEVWQLLAGCHNNDCLVEKYRLLITKE
SPQDSAITRDINRTFPAHDYFKDTGGDGQDSLYKICKAYSVYDDEIGYCQGQSFLAAVLL
LHMPEEQAFSVLVKIMFEYGLRELFKQNFEDLHCKFYQLERLMQEYITDLYTHFLEISLE
AHMYASQWFLTLFTAKFPLYMVFHIIDLLLCEGISVIFNVALGLLKTSKDDLLLTDFEGA
LKYFRVQLPKRYRSEDNAKRLMELACSLKISQKKLKKYEREYHMMREQQAQQEDPVERFE
RENRRLQEANMRLEQENDDLAHEIVTSKIALRKDLDNAEEKADALNKELLMTKQKLIDAE
EEKRLLEEEAAQLKEMCRRELDKAESEIKKNSSIIGDYKQICSQLSDRLEKQQSSNKAEI
EKIRQKVDGCERCREFFNTEGRLKPVSFLKESCTMEDTDEEKESLKNQLREMELELAQTK
LQLVEAECKIQDLEHHLGLALNEVQAAKKTWFNRTISSIKTATGVQGKETS
NT seq 3216 nt   +upstreamnt  +downstreamnt
atggatgacaagacttcagtggggaagatcagtgtttcctctgattctgtgtcgaccgta
aacagtgaagactttgtgctggtttataagcaaggggatgaaatgcattctgcaaataat
ggtagtgacgatgaaaagaccggactaaagattgtggggaatgggagtgagcagcagctt
cagaaggaccttgaggatgtccttatggacacaccagctgaagatcaggatctgcatgta
aaggagattgaaaatgctcaggctgaagaagacccagtacaaccctcaaatgaagcctgt
attacatctgtgaatacggtcaactcatcatcagtaggactgcagaaaccagacatgagc
ctaccagttaaagcagcccaggaagaatgcctactcagcaccagtatgttctcgtcagtt
cctgatgaggacagtgtcttgttcagtaagcttacttacctagggtgtgcatctgtaaat
gctcctcgaagtgagattgaggcactaagaatgatgtctattctgcgggggcagtgccag
aacgcactagatgttaccctgtctgtacctaatttttccgaaggaactgtgagacttctc
gaccctcagacaaacactgaaatcgcaatgtacccaatctacaagattttgttttgtgtt
cgaggacatgatggaactacagaaagcgactgttttgcattcactgaaagtcattacaat
gcggagctctttagaatccacgtgttccgttgtgagatacaggaggctgtgagcaggata
ctttacagttttgcaacagctttccgtcgttcagccaaacagacaccactctcagcttct
acaccaccacaaatgtcagacagtgacatttttactttctctgtatcccttgagattaag
gaggatgatggcaaaggctatttcagtgcggtccctaaagaaaaagacagacagtgcttc
agacttcgccagggggtagacaagaagattgtcatttatgttcagcagacttccaacaaa
gagctagccattgaaaggtgttttgggctgcttctcagtcctgggaaagatgtgcggaat
agtgatatgcacctattagaactggaatccatgggcaaaagttctgatggaaaatcatac
attatcactgggagttggaatacaaaatccccgcattttcaggctgtgaatgaagaaact
ccaaaagacaaagttcttttcatgaccaccgctgtagatctagtgattacagaagttcag
gagcccgtacgtttcctcttagagaccaagattcgagtctgtgcagtcaatgaacgcctg
ttttggccttttagcaaaaggagttccacagaaaatttctttctaaaactgaagcagatt
gaacgtaaagagcggaagaataactgtgataccttttatgaagtaatatgtttggagagc
gagtcagagagagagagaaggaaaacaactgccagtccatcaatccgtctgttgcagtac
gggcaacaaggaaccagtattccctccccaccagaagatgatgaagaagacgataatgat
gaacctctcttgagtgggtctggtgatgtgtctaaggaatgtgctgagaaaatcctagaa
acctggggtgatcttctgtcaaaatggcatctaaatctaagtgttcggccaaagcaacta
tcggggcttgtaaggagcggtgtgccagaggcccttagaggagaagtgtggcaactgcta
gcaggatgtcacaacaatgactgcctggtggaaaaatacagactgctcattactaaagag
tccccgcaagacagtgctattacacgggatatcaacagaacttttccagctcatgattac
ttcaaagacacagggggcgatgggcaggactccctttacaagatttgtaaggcctattct
gtgtatgatgacgagattggttattgccaaggacagtcttttcttgctgctgttcttctg
ctgcatatgcctgaagaacaagcattcagtgtcttggttaaaatcatgttcgagtatggt
ctcagggaactcttcaaacagaattttgaagatctgcattgcaaattttaccagcttgag
cgcttgatgcaggagtacatcacggacctttacacccatttcttagagatcagtctggaa
gcccacatgtatgcgtcccagtggtttctcaccctctttactgctaagtttccactatat
atggtcttccacatcattgacttgctgctgtgtgagggaataagcgtcatattcaacgtt
gcacttggattgttaaaaacttctaaagatgacctactgttgacagactttgaaggagct
ttgaaatatttccgagttcaacttcccaagcgttaccgttctgaggacaatgccaaaagg
ctgatggaactagcctgcagcctaaagattagccagaaaaaactcaagaaatacgagcgg
gagtaccacatgatgagagagcagcaggcgcagcaggaagaccctgtggaaagatttgag
cgtgaaaaccgtcggttgcaggaggcaaacatgaggctggaacaagaaaatgatgacctc
gcccatgaaattgtcactagtaaaatagcactacgtaaggatctggataatgcagaggaa
aaagctgatgctcttaataaggagttactaatgactaaacaaaagcttattgatgcagag
gaggagaaaagactcctagaggaagaagctgcacagctgaaggaaatgtgtcgtcgggag
ctcgataaagcagagtctgaaatcaagaagaatagctcgataattggagattacaaacag
atatgttcccaactaagcgatcgtcttgaaaagcaacagtcttcaaacaaagcagaaatt
gagaaaatccggcaaaaggtagatggatgcgagcgttgcagagaatttttcaacacagag
ggtcgtttgaagccggtcagctttttgaaggagagctgcaccatggaggacacagatgaa
gagaaagagtctctgaagaaccagcttcgggagatggagttggaactggcccaaacgaag
ctgcagctggtagaggcagagtgtaaaatacaggacttggagcaccacttgggccttgct
cttaatgaagttcaagctgcaaaaaagacctggttcaacaggaccatcagctccataaaa
actgccacaggagtgcaaggaaaagagacctcttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (28)   
   KEGG ORTHOLOGY (1)   
   RefGene (23)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (5)   
   Pfam (5)   
All databases (41)   

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