KEGG   Xenopus laevis (African clawed frog): 108700742
Entry
108700742         CDS       T01010                                 
Symbol
abca5.L
Name
(RefSeq) cholesterol transporter ABCA5
  KO
K05648  ATP-binding cassette, subfamily A (ABC1), member 5
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:xla00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    108700742 (abca5.L)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:xla02000]
    108700742 (abca5.L)
Transporters [BR:xla02000]
 ABC transporters, eukaryotic type
  ABCA (ABC1) subfamily
   ABCA5, 6, 8, 9, 10 subgroups
    108700742 (abca5.L)
SSDB
Motif
Pfam: ABC_tran ABC2_membrane_3 AAA_21 RsgA_GTPase AAA_29 MMR_HSR1 AAA_22 AAA_23 AAA_15 ATP-synt_ab AAA_30 nSTAND3 AAA_16 Dynamin_N AAA_25 AAA_5 Vps27_GAT-like
Other DBs
NCBI-GeneID: 108700742
NCBI-ProteinID: XP_018090159
Xenbase: XB-GENE-6489343
UniProt: A0A1L8ERP1 A0A974BWY1
Position
9_10L:complement(221968..263774)
AA seq 1640 aa
MTSEIKDVGLWRQTRTLLYKNYLIKCRTKRDSIQEILYPIIWWLISLLWASMVEQSKHYE
AMPNTLLGGLDGPSSRHLIIGYTPESDITQQIMALTASECYLTDITFKPYLNEEHMKTAS
SSFEEHFVGVVFDSSMSYKLRFSVYSVPDSTLYITPREDCHLWNCEATEYFYSTFTYLQA
CIDSSIIKMKTNYSSWEELKTTRAVIMGEQEVVVVDTFYNALMSVFLVMAFSPLGYSVVF
YVVFEKEKKVKEFMKLMGLHDTAFWLPWVLLYTGFILVISLVMAVVATTFFPFSKSNCFL
IFLLYALYGISLVLFALMLAPLFKNSKRAGAIVFLSTLVLGAVGIFIVLKEDFPNSFVWF
FSPFCQCTFMIGIAQVLHLEDFQRGAQFTHLKDGPYPLVITFIFLVVDSVMYLLLATYLD
QVLPGEYGLRQSPFFFLKPSYWSKRKKRYGELNESYFDRTVDLSEMIEPVSSELHGKEAI
RICCICKSFRKNNKPRNALQGLTFDIYEGQITALVGHSGTGKTTLMNILCGLCPPTEGFA
TVYGHRVTDIDEIQEASKMIGICQQTDIFFDVLTVEENLHIFASLRGIDEKTKEQEINKI
LFDLDMQALKHNHARTLSIGQKRKLSVAIAVLGNPKVLLLDEPTAGMDSCSRHTVWNLLK
NRKGNHVTVFSTHCMEEADILADRKAVISQGSLKCIGSSLFLKSKWGVGYRLSMDIKKPC
DVDALSSLITQHISGASLMQQSENSLLYSLPLKDVNKFPGLFSALDSGSDLGIITYGVSA
TTLEDVFFKLETEAEIDQSDNGIFSQRNLEDEGKWKSMEDIEQGLLELSLESSPCSVSGS
ALWKQQVATVAKLHFRNLHRETKSLRCMCLCLLFFLVPQVTLYLLGLSYHQSLAPIRLSA
DMYFSHPKLKSHKFLTSLLLQNSTGENIDELLGNLNSQKIKVDLINGSDYISASPHNAVL
NVFLSGKHYTYEAIFNASMVHSLPVLINTISNTVLRQLGVNESIEVWNSPFYQDFLHTSY
GFDFYFLIAYLGIMTGMLPYIAMENAYNYKVKAYSQLKMAGLYPSAYWVGQAAVDMPLFF
LMLLFMVGSMLAFKSGIDLHAGTVVAMIFCLIGYVPAVVLLTYVVSFTYKLISDTRQWWS
LIFAVTASISIIIIEAAIFFATSVTVTRLHVFFSIFFPVYPLLGCLTCFIKMSRNLAHSD
VHSLTQLGRLLVAVFAPYVHSLIFFLILRYLEMKNGGRSIRKDSVFRSQIKKTKPWKFAE
VPEDEDEDVRVERARVGEYMAPDCNEKPMVLVSGLHKEQDQTGKTILGKAMRKLVVNNVS
FCVRKGETLGLVGPNGAGKSTLLNMLVGQSELDAGQILMGDPAAGETGLSPPRFVGYSPQ
INYFWPEIKLQEHLDAYGAIKGMNSSVLKEVTRRIVETLDLKEHLQEPAKKLSVGNQRKL
SFALSMLGNPDIVLLEEPSTGMDPKNKQIMWKLIRTTLKGKEQAAVITTHSMEEAEAICD
RVAIMVSGQLRYIGSVQHLKSKFGRYFSLELKLDTRARDQNVELIHKEILQIFPNASHQE
SFSSLMSYKVPKEDVESLSQTFSELEQVKQMYNIEEYIFSQATLEQVFIELAKEQEEEDN
IATMNSTLWWERRQEDRVIF
NT seq 4923 nt   +upstreamnt  +downstreamnt
atgacttcggaaataaaagacgttggactttggaggcaaacaagaaccctgttgtacaag
aattatctgattaaatgtaggacaaagagggacagtatccaggaaatcctttatcccatt
atctggtggttaatttcgctgctgtgggccagcatggtggagcagagcaaacattatgaa
gcaatgcccaatactttgctcggggggctggatggacccagttctcggcatctaatcatt
ggatacaccccagagtccgacataacccagcagattatggcactgaccgcatcggaatgt
tacctgacagatataacattcaagccatatctgaatgaagaacacatgaaaacagcgagt
tcctcgtttgaagagcattttgttggtgtcgtatttgacagttccatgtcctacaagctg
agattttctgtctactctgtcccagattccacactttacattactccaagagaggattgt
catctgtggaattgtgaagccactgagtacttttattcgacgttcacctatttgcaagcg
tgcattgattcttctataatcaagatgaagactaattattcttcctgggaggaactgaag
acgactcgggcagtaatcatgggggagcaggaagtggtggtggttgacacattctataat
gctcttatgtctgtgtttctggtgatggccttctcaccgcttggatactccgtagtattt
tatgttgtgtttgaaaaggaaaagaaggtgaaggagttcatgaagctaatgggactccac
gacactgctttctggctaccttgggttctcctatacacaggcttcattttggttatatct
ctggtgatggcggtggttgcaactaccttcttccctttcagcaaaagcaactgcttcttg
atttttctgctgtatgctctctatgggatatctctggttttatttgctctcatgctggct
cccctgttcaagaactccaaacgagcaggtgccattgtgttcctttccacactggtctta
ggagcagtgggcattttcattgtgctcaaagaagactttccaaattcatttgtttggttc
ttcagccctttttgccagtgcacattcatgattggtatagcccaggtcttgcatttagaa
gactttcagaggggagcccagttcacacatctaaaggatggtccataccctcttgtaata
acgtttattttcctagtcgtggacagtgtcatgtacctgcttctggctacatatctggat
caggttcttccaggtgaatatggccttcggcagtctccatttttcttcctcaaaccgtcc
tactggtccaagagaaaaaaacgatatggggagctgaatgaaagttattttgacagaact
gtagacctgagtgagatgatagaaccagtgtcttcagaacttcatgggaaagaagctatc
aggatttgctgcatttgcaagtctttcaggaagaacaacaagccaagaaatgcccttcaa
ggtttaacatttgatatatatgaaggtcaaattacagcactggttggccacagtggcaca
gggaagacgacactcatgaatattttatgtgggctctgcccgccaactgaaggttttgcc
actgtttatggccacagagtgacagacatagatgagattcaagaagccagcaagatgatt
ggaatttgccagcagactgatattttttttgatgttctcacggtggaagagaaccttcac
atttttgcctccttgaggggaattgatgagaagaccaaggagcaagagataaataagatc
ttatttgatttggatatgcaggccctgaaacacaaccatgccagaactctcagcattggc
cagaaacggaaactctctgtggccattgctgttctgggaaaccccaaggttttgcttctg
gatgaacccactgcaggcatggactcatgctctcggcacacagtgtggaacctgctgaag
aaccggaagggaaaccatgttactgtattcagcactcactgtatggaggaggcagatatt
cttgcagatcgtaaagcagtgatttcacagggttcgctcaaatgcattggttcctcgctg
tttctcaagagcaaatggggtgtcggctaccgcttaagcatggatatcaagaaaccctgt
gatgtggatgccctgtcttcactcattacacagcacatttctggagcaagtttaatgcaa
cagagcgagaattcattgctctattcattgccactaaaggatgtcaacaaattcccaggt
ttattctctgccctggacagtggatcagacttgggaataatcacatatggagtgtcagcc
accacgttggaagatgttttctttaaactggagacagaggcagaaattgatcaatcagat
aatgggatcttcagtcaaaggaacctggaagatgagggcaaatggaaatccatggaagac
atagagcagggattgttggaactgtcactagaatcatcgccctgttcggtgagcggttca
gctctatggaagcagcaggttgcgactgtagccaagttacatttccgtaatttgcatcgg
gagactaaatctttacgatgtatgtgcttgtgcctgttattcttcctggtgccacaggtg
actctgtatctcctaggcctgtcctaccaccagtcgctggctcccatcagactctctgca
gatatgtacttttcccatccgaagctaaaaagccacaagttcctcacaagccttctgctg
cagaactctactggtgaaaatatcgatgagctccttggcaacttgaacagccaaaagata
aaagtcgacttgatcaatggaagtgactacatatcggcatctccccataatgcagttttg
aatgtgttcctgtctggaaagcattatacatatgaagccattttcaatgcctcaatggtg
cattccctgcctgttctcatcaacacaatcagtaacactgtgctcaggcaacttggtgtc
aatgagagtatcgaagtctggaatagccccttttaccaggactttttacacacatcctac
ggattcgatttttattttctcatcgcatatctgggaatcatgacaggcatgctaccgtat
attgctatggaaaatgcctataactataaggtaaaagcttattctcagctgaagatggcc
ggcctatacccatcagcttattgggtaggacaagctgcagtggacatgcctctcttcttt
ctgatgcttcttttcatggtcggaagcatgcttgcttttaaatctggaattgatctccat
gctggaacagtggtggcaatgattttctgcctcattggctacgtccctgcagttgtgctt
ctgacatacgtggtttccttcacttacaaacttatcagtgacaccaggcagtggtggtcc
ttaatctttgcagtgaccgcttccatttccatcattattattgaggcagcaatcttcttt
gcaaccagtgttaccgttacacggcttcatgtgttcttctccatatttttccctgtctat
ccactcctaggctgccttacctgctttataaagatgtcaaggaacttggctcacagtgat
gtgcacagcctaactcagcttggaaggctcttggtggcagtgtttgctccttacgtgcat
tctctgatcttcttcttaatcctgcgctatctggagatgaaaaatggtgggcgatccata
aggaaagattcagtttttagaagccaaataaaaaaaaccaagccatggaagttcgctgaa
gtacctgaagatgaagatgaggacgtccgggtggagagagctcgggtgggtgaatatatg
gcaccggactgtaatgagaaaccaatggtgttagttagtggcttgcacaaagaacaggat
caaactggtaaaacaattcttgggaaagcaatgaggaaacttgtagtgaataatgtatcc
ttttgtgtaaggaaaggagaaacactggggctggtaggaccaaacggagccggaaaaagt
accctgcttaacatgctggtgggacagagtgagctggatgctggccagatattgatggga
gatccagctgcaggcgagacaggcctcagcccaccaaggtttgtgggatattccccacaa
ataaactatttttggccagagataaagcttcaggagcaccttgacgcctatggagccatc
aaaggcatgaacagcagcgttctgaaagaagtaacaaggagaatagttgaaaccttggac
ctgaaggaacacctccaggagccagccaagaagctctcagtcggaaaccagagaaagctg
agctttgcactgagcatgctgggtaatcctgatattgtgcttctagaagaaccctccact
ggcatggatcccaaaaacaaacagattatgtggaagctgattagaactacattaaagggc
aaggaacaggcagctgtgattacaacccattccatggaagaggctgaagccatctgtgac
agggttgccattatggtatccggccagttaagatacattggctctgtccagcacctgaag
agcaaattcggtcgatatttctcactagagctaaaacttgatacaagagccagagatcag
aatgtggagcttattcacaaggagatcctgcaaatatttcccaatgcaagtcaccaggag
agcttttcctctctgatgtcttacaaagttcctaaggaggatgtggagtccctctcccag
acattctctgaactggaacaagttaaacaaatgtataacattgaagaatacatcttctct
caggcaactctggaacaggtattcattgagttagcaaaagaacaagaggaagaagataac
attgccacaatgaacagcacattgtggtgggagagaagacaggaggacagggttattttc
tga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (64)   
   KEGG ORTHOLOGY (1)   
   RefGene (59)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (17)   
   Pfam (17)   
All databases (89)   

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