KEGG   Xenopus laevis (African clawed frog): 108702819
Entry
108702819         CDS       T01010                                 
Symbol
itgb4.S
Name
(RefSeq) integrin beta-4 isoform X2
  KO
K06525  integrin beta 4
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla04510  Focal adhesion
xla04512  ECM-receptor interaction
xla04810  Regulation of actin cytoskeleton
xla04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:xla00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    108702819 (itgb4.S)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    108702819 (itgb4.S)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    108702819 (itgb4.S)
   04810 Regulation of actin cytoskeleton
    108702819 (itgb4.S)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:xla04147]
    108702819 (itgb4.S)
   04515 Cell adhesion molecules [BR:xla04515]
    108702819 (itgb4.S)
   04090 CD molecules [BR:xla04090]
    108702819 (itgb4.S)
Exosome [BR:xla04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   108702819 (itgb4.S)
  Exosomal proteins of bladder cancer cells
   108702819 (itgb4.S)
Cell adhesion molecules [BR:xla04515]
 Integrins
  Integrin beta subunits
   108702819 (itgb4.S)
CD molecules [BR:xla04090]
 Proteins
  108702819 (itgb4.S)
SSDB
Motif
Pfam: Integrin_beta fn3 Pur_ac_phosph_N Integrin_B_tail Calx-beta PSI_integrin I-EGF_1 EGF_2 SEA
Other DBs
NCBI-GeneID: 108702819
NCBI-ProteinID: XP_018094013
Xenbase: XB-GENE-17343652
UniProt: A0A974H171 A0A1L8EMZ9
Position
9_10S:39764123..39814097
AA seq 1770 aa
MLNPHVSGGFLLLVLLLVLPASQSQSNKYNPCVASRATSCSACIRAYKDCSYCADEGFSS
VRCDLAENLRRYGCSERGIVYMRSEVQTQQNYEINTLVSKTQVSPQRMSMSLRAGEETSF
NLKVFEPLDTPVDLYILMDFSHSMSDDLANLKNMGQELANVVSTLSKNYTIGFGKFVDKV
TVPQTDMRPQKLKQPWLDSTPPFSFKNVIRLTSNVEKFRSELMKEKISGNLDPPEGGFDA
ILQTAVCTSQIGWRKGSTHLLVFSTESAFHYEADGMNVLDGILKRNDEQCHLDASGYYTH
DTVQDYPSVPSLVRLLAKNNIIPIFAVTNYSYSYYDKLSKYFKVSEIGELKEDSSNIVDL
LQEAFTQIRSRMDIRDDNTPRAMDISVSSETAKVTETGSFQVTRGEVGTFKVKVKALERV
GNQHVCELPPQDQGSQILLKPSTFTDGLKIDASLICDSCPCELQKALNSPKCSFNGDFVC
GRCECRDRWRGEFCNCSSTDTKSTQSCIAPGSTEICSGRGDCLCGTCQCHSESPSQQYQG
EFCQFNNFQCPRFLGYMCNDRGRCYMGACVCVAGWEGDSCQCPTSNQTCLDRSGGLCSNR
GKCVCGRCLCDTVSQYTDATCEFSYSLRQLGVCEDLRTCVQCQAWGTGENKGKKCEACEI
MIKMVDELKKVDERTENCTFRDEEDDCTYEYTVDPNAVQGNYTVLVKNKKECPPGAFLWL
IPLLIFLMLLLGLLLLLCWKYCACCKACLAMLPCCGPGRSVGFKEDHYMLRQSLMSSDYL
NTPLVRSGNLKGGDTVRWKINNNVQRPPPSSGDLNPKELVPYGVSLRLARLFTENLSKPQ
SHECSQLRQEVEDSLNEVYKVIPGTHKLKQTTFRLQSNAGKRQDHTIAETILMAPREAEP
EIVKVTEKHVTQEAFQNMKVSPGYYTVTSDRDAHGLVEFQEGVELVDVRVPLFIREEDDD
EKQLLVEALEVPTGIAGLGRKLVNITIIKEQAKSIVTFVKPAYTYSRHEQVARVPVSREI
IQNGKTQVTYRSQDLTAREGKDYTFSEGELTFQKDDTQSEILVPLLGRSEVDTLLGNRQV
KQFLLELSNPKYGAKIGKYPQCTITIDDTADVIQKAMAVQSVQSPRGKTGAPFNLNAQAL
SARKIRLNWMPPPGKPTGYKVRYWIQGDSESDATVLDTKVPSAELTNLYPYCDYEMRVCA
YNAQEEGPYTDIVTCQTLEDVPSEPGRLAFNVISSTVTQLSWAEPAETNGEITAYEVTYA
MVNEDNKPIGPTKKVLIQDPKKRMVLIENLRESQPYKYTVRASNKAGWGPEREATMNLAT
QPTRPMSIPIIPDAPIIDAEAGEEYDSYLMYSTDVLLSPVGSKRPSVSDESEQLLNGRTE
FSYSGGSLNRIMASGYQKLSPHVQNETYRFGSTSSQHTTTSVISGQGASGQNRLGLPPLV
LGVGRGRTHSEDVRDALTSLDVAIQDTRLSPGVPDTPTRLVFSALGPTSLKVSWQEPQCE
RELLGYRVHYQLLNGGESRTIDVTNPRENSVVVEDLLPNHSYMFRVKGQSMEGWGPEREG
VITIESQVDPQSPLSPVPGSPFTLSTPSAPGPLVFTALAPDSLQLSWVRPRKPNGTILGY
LITCEMLHGGGEPRTIYIEGDKPETSLTVPFLNENLPYKFKVQAKTTQGFGPEREGIITI
ESQDGGSFSQFGTQQITRREVYNLPGEYTQRNITHSTLTEPFFSDGMTVTSRRIEGANTV
TQQVTKEFVTRTMVSGGSLSRQVERQFYEA
NT seq 5313 nt   +upstreamnt  +downstreamnt
atgctgaaccctcatgtgtcagggggtttcctcctgctggtccttctcttagttcttcca
gcttcccagtctcagagcaacaaatataacccctgtgtggcctctagagcaaccagttgc
tcggcctgtatccgggcttacaaagactgttcctactgcgcagatgagggtttctctagt
gtacggtgtgacctggcggagaatctcagacgatatggctgcagcgagagagggattgtt
tacatgagaagtgaagtccagacccagcagaactatgaaattaacactcttgtaagcaaa
actcaagtgtcccctcagaggatgtctatgagtcttcgtgctggggaggaaacctcattc
aacttgaaagtgtttgagccactggacacccctgtggatttgtatatcctgatggatttc
tctcactccatgtcagatgatttagccaacctaaagaacatgggtcaggagttagccaat
gttgtaagcactctctccaaaaattacaccattggatttgggaaatttgtggacaaagtg
actgtaccacagactgacatgagacctcagaaactaaagcaaccctggttagacagcact
cctcctttctccttcaagaacgtgattcggctaacaagcaacgtagagaaatttagaagt
gaacttatgaaagagaaaatctctggaaatctcgatcctccagaaggggggtttgatgcc
attctacagactgctgtgtgcacgagtcaaattggctggagaaaaggaagtactcatctg
ttagttttctctactgaatcagcattccattatgaagctgatgggatgaacgtccttgat
gggatactgaagcggaatgatgagcagtgccacttggatgcctctggatactacacacat
gacactgttcaggattatccatctgtgccctcacttgttcgactcctagcaaagaacaac
atcatcccgatcttcgccgtcaccaactactcctacagttactatgataagctgagcaag
tatttcaaagtatctgaaattggagaattgaaagaagattcctccaacattgtggatctc
ttgcaggaggcctttacgcaaattcgctccaggatggatatccgagatgataacactcca
cgtgcgatggatatctcagtctcatcggagacagctaaagttactgaaacaggatcgttt
caagtcacccggggggaggtgggtaccttcaaagtgaaggtgaaggctttagagcgggtg
ggcaaccagcatgtgtgtgaactaccaccacaggaccaagggagccaaattctcctcaaa
ccttccacctttacagatggccttaagattgatgcttctctgatctgcgacagctgcccc
tgtgaattgcaaaaggcgttgaattcacccaagtgcagctttaatggtgactttgtgtgt
ggacgctgtgagtgcagggaccgctggaggggagaattctgtaactgctccagcacagac
acaaaaagcacccagtcgtgtattgcaccaggcagtacggagatttgctccggtaggggt
gactgcctctgtggtacctgtcagtgtcactcagagtccccaagccaacagtaccagggg
gagttctgccagttcaataacttccagtgcccacgatttcttggatacatgtgcaatgac
agagggcgttgttacatgggagcctgtgtgtgtgttgctggatgggaaggagacagttgt
cagtgtcctaccagcaatcaaacctgccttgataggagtgggggtctgtgcagtaatcgt
gggaagtgtgtatgtgggcgctgcctgtgtgatactgtgtcgcagtatacagatgccaca
tgtgaattctcctattcactgcgccaactgggcgtgtgcgaagatctacggacatgtgtg
cagtgccaggcctggggaacaggagagaataagggcaaaaaatgtgaagcgtgtgaaatt
atgattaaaatggtggatgagttgaagaaagtggatgaaaggaccgagaactgcactttc
cgggacgaagaagacgattgcacctacgagtacacagtagacccaaacgcagtgcaagga
aactacactgtgctggtcaaaaacaaaaaggaatgtcctcctggagccttcctatggctt
attcctcttctcatctttctgatgcttctgcttgggctcttattgctcctttgctggaaa
tactgtgcctgttgcaaggcttgcttagcaatgcttccttgctgtggaccaggacgttca
gtgggatttaaagaagaccactacatgttgaggcaaagcctgatgtcatctgattacctg
aataccccactggtgcgctcagggaacctcaagggtggggacacagtgagatggaagatc
aacaacaatgtgcaacgtccacccccctcctctggagatctgaaccccaaggagcttgtc
ccatatggagtctcactgcgtcttgcccggctattcactgagaacctgtcaaagccacaa
tcccatgaatgttcccagctgcgtcaggaggtggaggattcgctaaatgaggtatacaag
gtgatacctgggacccacaagttgaaacagacaactttcaggcttcagtccaatgcagga
aaaagacaggatcacactattgcagagaccattttgatggctcccagggaggctgaacct
gagattgtaaaggtgacagagaaacatgtgacacaggaggctttccagaacatgaaggtt
tccccaggatactatacggtgacatcagacagagatgctcatggacttgtggagttccag
gagggagttgaactggtagatgtgcgggttcctctcttcatcagggaagaggatgatgat
gagaagcagctgttggtggaagctctggaagttcccacaggaattgccggtttggggagg
aaactggtcaatattactattatcaaagagcaagccaagagcatagtgacgtttgtgaaa
cctgcctacacctacagccgacatgaacaggttgctcgtgtcccagtctctcgtgagatc
atccagaatggaaagacacaagtcacatatcgttcccaggacctgactgctcgggagggg
aaggattatacattctctgagggggagctcaccttccagaaagatgacacacagtcagaa
attctagtcccgctacttggtcgttcagaagttgacactctgctgggaaatagacaagtc
aaacagttccttttagaactcagtaatcctaaatatggagccaagattggcaaataccca
caatgcaccatcactattgatgacacagcagatgttatacaaaaagcaatggcagtccag
tctgttcagtcaccccgtgggaagacaggtgctccgttcaacctgaacgcccaggctctc
agtgccaggaaaattcgactcaactggatgcctcctcctggaaaacccacagggtacaag
gtacgttactggattcaaggagattcagagtcagatgccactgtcctggatacaaaagtg
ccctctgcagagctgaccaatctgtacccatactgtgactatgaaatgcgggtatgtgca
tacaatgctcaagaggagggtccctacactgatatagtcacctgccagaccttggaggat
gtacccagtgaacctggccgtctggcctttaacgtcatttcaagcacagtgacacagtta
agttgggcagagccggctgaaaccaatggtgaaatcacagcatatgaggtcacctatgca
atggtcaacgaggacaacaaacccattggtcccacaaagaaagtcctgattcaagatcca
aagaagcgcatggttctaattgaaaacctacgagaatcccagccatacaaatacacagtg
agggccagcaacaaagctgggtgggggccagagagagaggccaccatgaacctagctacc
cagcccacccgcccaatgtcaattcctattattcctgatgctcctattattgatgctgaa
gctggggaggaatatgacagttacttgatgtacagcaccgatgtcctgctctctccagtg
ggcagcaagagacccagtgtatccgacgagtcagagcaattacttaatggacgcacagaa
ttttcctactcggggggcagtctcaaccgtatcatggcatcaggataccagaaactcagc
cctcatgtgcagaatgaaacctacaggtttggtagcaccagctcccaacatacaaccaca
tcagtcatatcagggcaaggtgcatcagggcagaacagactggggctacccccacttgtg
ttaggagttggaaggggacgtacccactcagaggatgtgagggatgctctgacgagcttg
gatgtggctatacaggatacacgtctttctccaggggtccctgatacccccacacgtttg
gtattttcagccctgggacccacctcccttaaggtcagctggcaggaaccacaatgtgaa
agagagcttctggggtacagagtgcactatcaattactgaacggaggtgaatcaaggacc
attgacgttacaaacccacgggagaactcagtagtggtggaagacttgctccccaatcac
tcgtacatgttccgggtgaaaggacaaagcatggagggttggggccctgaaagagaaggt
gttatcactattgaatcacaagtggatcctcagagcccactcagccctgttccaggatct
ccgttcaccttaagcacccccagtgctcctggaccactggttttcacagctctggcccct
gactccctgcagttgagttgggtgagacctcgaaagcctaatggaacaatactggggtac
ctgatcacttgcgagatgttgcatggaggaggagaaccacgaactatctacattgaaggt
gacaaaccagagacttcccttacggttcctttcctgaatgaaaatctgccatacaaattt
aaggtccaggcaaaaacaacacagggttttggaccagagcgagaggggataattactatt
gaatctcaagatggaggaagcttttctcagtttggaacacaacagatcacacgtcgggag
gtgtacaatctcccaggagaatatactcaaagaaacatcactcactccaccctaacagaa
ccatttttttcagatggaatgaccgtcacctcgcgccgtatcgagggagccaacacagtt
acacaacaggtcaccaaagagtttgtcacacggaccatggtgtctggtggctccctcagc
aggcaagtggagcgccagttctacgaggcatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (65)   
   KEGG ORTHOLOGY (1)   
   RefGene (60)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   XENBASE (1)   
Protein sequence (5)   
   UniProt (2)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (9)   
   Pfam (9)   
All databases (91)   

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