KEGG   Xenopus laevis (African clawed frog): 108704788
Entry
108704788         CDS       T01010                                 
Name
(RefSeq) TATA-box-binding protein
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:xla00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    108704788
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:xla03000]
    108704788
   03021 Transcription machinery [BR:xla03021]
    108704788
Transcription factors [BR:xla03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    108704788
Transcription machinery [BR:xla03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     108704788
  RNA polymerase III system
    TFIIIB
     108704788
  RNA polymerase I system
    SL1/TIF-1B
     108704788
SSDB
Motif
Pfam: TBP
Other DBs
NCBI-GeneID: 108704788
NCBI-ProteinID: XP_041420553
UniProt: A0A8J1KUW1
Position
5S:complement(61881536..61907114)
AA seq 214 aa
MEVYFESSKLSCSKEEAKVGARRLARSLQKLGFQVKFTEYKVVNVLAVCTMPFEIRLNEF
TRRNRPHASYEPELHPAVRYRIKSLRATLQIFSTGSITVTAEWIQDDPEFDGDIAPPDQA
APPPPDEAALPPVQAPSPQRAAPLPERAAAPPPDQAPPPNQGLSVGTQTENAYYDHTELL
VTLVHQVNAIRQDLGEVREIVESLQRVVAPPPPL
NT seq 645 nt   +upstreamnt  +downstreamnt
atggaggtttactttgaaagcagcaagttaagttgcagtaaggaagaagccaaggtgggt
gcaagacgtttggcccgttctttgcagaaacttggtttccaggttaaattcactgagtat
aaagttgtgaatgtgttagctgtgtgtaccatgccatttgaaataagattgaatgaattt
accaggcggaatcgccctcatgcaagttatgagccagaacttcaccctgcagtccgctat
agaataaagtctctgagagccactctgcagatcttctctactggcagtattacagtaaca
gctgagtggatccaggatgatcctgaatttgatggggatattgcaccacctgaccaggca
gcaccgccaccacctgacgaggcagcactgccacctgtccaggcaccatcacctcaacgg
gcagcaccactacccgaacgggcggcggcaccaccaccggaccaggcaccaccacctaac
caggggctcagtgtaggcactcagactgaaaatgcctactatgaccacactgagctcctg
gtcaccctggtccaccaggtcaatgccatcaggcaggatctgggagaggtcagggagatt
gtggagtccctgcagagggtcgttgctcctcctcctccactgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (15)   

Download RDF
DBGET integrated database retrieval system